DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5535 and AGP2

DIOPT Version :9

Sequence 1:NP_649019.2 Gene:CG5535 / 39990 FlyBaseID:FBgn0036764 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_009690.1 Gene:AGP2 / 852429 SGDID:S000000336 Length:596 Species:Saccharomyces cerevisiae


Alignment Length:552 Identity:102/552 - (18%)
Similarity:197/552 - (35%) Gaps:144/552 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 TRKKPLEDSNESKLAKVLSAFDLTALGIGSTLGVGVYVLAGEVSKQYAGPA-VVVSFLIAAIASI 86
            ||:| ||:.:...:|            |...:|..::|..|:...: .||| ::::|.:..:..:
Yeast    84 TRRK-LENRHVQLIA------------ISGVIGTALFVAIGKALYR-GGPASLLLAFALWCVPIL 134

  Fly    87 FAGLCYAEFGARVPKAGSAYIYSYVTIGEFIAFLIGWNLILEYAIGSASVVKGLSTYL-----DQ 146
            ...:..||.....|.:......:...:.:.:|.:..||......:.....:..::|.:     |.
Yeast   135 CITVSTAEMVCFFPVSSPFLRLATKCVDDSLAVMASWNFWFLECVQIPFEIVSVNTIIHYWRDDY 199

  Fly   147 LCGNPMSSFLGTHMPLNIEGMGAYPDLFAFVVTILFSLAIAVGAKESTRVNNVFTMLNLGVVLFV 211
            ..|.|::..:..::.::|..:..|.::..::.:  |.:.:|:|         :||.      .|:
Yeast   200 SAGIPLAVQVVLYLLISICAVKYYGEMEFWLAS--FKIILALG---------LFTF------TFI 247

  Fly   212 IIAGLFKVSSSNWSIPKSQVPE-------GYGDGGFMPY--------GVSGIIKGAAVCF----Y 257
            .:.|      .|        ||       .||:..|..|        ..||..:|...|.    :
Yeast   248 TMLG------GN--------PEHDRYGFRNYGESPFKKYFPDGNDVGKSSGYFQGFLACLIQASF 298

  Fly   258 GFIGFDCIATAGEEAKNPKKSIPFA---VIVSLAMIFLAYFGVSTVLTMMLPYFEQDEKAPL--- 316
            ...|.:.|:....|.|.|:|.:|.|   |.|.|..:||   |....:.::....:.|..|.:   
Yeast   299 TIAGGEYISMLAGEVKRPRKVLPKAFKQVFVRLTFLFL---GSCLCVGIVCSPNDPDLTAAINEA 360

  Fly   317 -------PHVFRINGW--HVAEYVVSI---------GAMFGLCSSMMGAMFPLPRIVFAMSNDGL 363
                   |:|..:|..  .:...:|:|         |..:..|||         |..:.|:.||.
Yeast   361 RPGAGSSPYVIAMNNLKIRILPDIVNIALITAAFSAGNAYTYCSS---------RTFYGMALDGY 416

  Fly   364 LFKFLGDISEKYKTPFKGTMITGMLTGILAAVFNLSQ--------LVNMMSIGTLLAYSMVASCV 420
            ..|.....: ::..|.....|:  |...|.::..|:.        |:|:::...|:  :.|..|:
Yeast   417 APKIFTRCN-RHGVPIYSVAIS--LVWALVSLLQLNSNSAVVLNWLINLITASQLI--NFVVLCI 476

  Fly   421 LMLRYEVDDRRESRIVANGRATGLEQDR----PCALWRRIFNLNGQTVPTKQTSRIVTYSVTLFS 481
            :.|.:.             ||..::||.    |...|.:.:......|.......|..|:|....
Yeast   477 VYLFFR-------------RAYHVQQDSLPKLPFRSWGQPYTAIIGLVSCSAMILIQGYTVFFPK 528

  Fly   482 LW---CMVFSQILTKFEEDLANVTSFDGIKLV 510
            ||   ..:||.::.     ..|:..:.|.|.:
Yeast   529 LWNTQDFLFSYLMV-----FINIGIYVGYKFI 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5535NP_649019.2 2A0303 20..585 CDD:273330 102/552 (18%)
AA_permease_C 535..585 CDD:290617
AGP2NP_009690.1 LysP 41..596 CDD:223903 102/552 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 90 1.000 Inparanoid score I1545
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.950

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