DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5535 and SSY1

DIOPT Version :9

Sequence 1:NP_649019.2 Gene:CG5535 / 39990 FlyBaseID:FBgn0036764 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_010444.1 Gene:SSY1 / 851738 SGDID:S000002567 Length:852 Species:Saccharomyces cerevisiae


Alignment Length:600 Identity:112/600 - (18%)
Similarity:208/600 - (34%) Gaps:173/600 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 TRKKPLEDSNESKLAKVLSAFDLTALGIGSTLGVGVYVLAGEVSKQYAGP-AVVVSFLIAAIASI 86
            |||..::        :.|....:..|.||:...||:::.:|: :...||| ..::.|.:.....:
Yeast   272 TRKYHIQ--------RKLKVRHIQMLSIGACFSVGLFLTSGK-AFSIAGPFGTLLGFGLTGSIIL 327

  Fly    87 FAGLCYAEFGARVPKAGSAYIYSYVTIGEFIAFLIGWNLILEYAIGSASVVKGLSTYLDQLCGNP 151
            ...|.:.|....:|.:......:...:.:...|.:||...:...:...:.|.. ||:        
Yeast   328 ATMLSFTELSTLIPVSSGFSGLASRFVEDAFGFALGWTYWISCMLALPAQVSS-STF-------- 383

  Fly   152 MSSFLGTHMPLNIEGMGAYPDLFAFVVTILFSLAIAVGAKESTRVNNVFTMLNLGVVLFVIIAGL 216
               :|..:..:||.     ..:.|..:|:..:.:|.|         |:..:..:|.:::|  ||:
Yeast   384 ---YLSYYNNVNIS-----KGVTAGFITLFSAFSIVV---------NLLDVSIMGEIVYV--AGI 429

  Fly   217 FKV---------------SSSN----------WSIPKSQVPEGYG---------DGG-FMPYGVS 246
            .||               ...|          |...||.....||         |.| ....|:|
Yeast   430 SKVIIAILMVFTMIILNAGHGNDIHEGVGFRYWDSSKSVRNLTYGLYRPTFDLADAGEGSKKGIS 494

  Fly   247 G----IIKGAAVCF---YGFIGFDCIATAGEEAKNPKKSIPFAV-----IVSLAMIFLAY-FGVS 298
            |    .:..|:|..   :.|.|.:....|..||.||:|:||.|.     ||.::.:||.: .|::
Yeast   495 GPKGRFLATASVMLISTFAFSGVEMTFLASGEAINPRKTIPSATKRTFSIVLISYVFLIFSVGIN 559

  Fly   299 TVL--TMMLPYFEQDEKAPLPHVFRING--WHV-------AEY-VVSIGA-----------MFGL 340
            ...  ..:|.||....:.....:.:..|  |.:       .:| .:|:|.           .|||
Yeast   560 IYSGDPRLLSYFPGISEKRYEAIIKGTGMDWRLRTNCRGGIDYRQISVGTGYSSPWVVALQNFGL 624

  Fly   341 C---------------SSMMGAMFPLPRIVFAMS---NDGLLFKFLGDISEKYKTPFKGTMITGM 387
            |               ::.:.::|...|.::|||   ....:|    :|..|...|:...:.:.:
Yeast   625 CTFASAFNAILIFFTATAGISSLFSCSRTLYAMSVQRKAPPVF----EICSKRGVPYVSVIFSSL 685

  Fly   388 LTGIL------AAVFNLSQLVNMMSIGTLLAYSMVASCVLMLRYEVDDRRESRIVANGRATGLEQ 446
            .:.|.      .|:.|...|.|:.|..|.:.:..:....|...|.:..|::              
Yeast   686 FSVIAYIAVDQTAIENFDVLANVSSASTSIIWMGLNLSFLRFYYALKQRKD-------------- 736

  Fly   447 DRPCALWRRIFNLNGQTVPTKQTSR--IVTYSVTLFSLWC--MVFSQILTKFEEDLANVTSFDGI 507
                     |.:.|..:.|.|...:  :..|.:...||:.  |.:...:..|....|..:::.|:
Yeast   737 ---------IISRNDSSYPYKSPFQPYLAIYGLVGCSLFVIFMGYPNFIHHFWSTKAFFSAYGGL 792

  Fly   508 KL---------VLGT 513
            ..         ||||
Yeast   793 MFFFISYTAYKVLGT 807

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5535NP_649019.2 2A0303 20..585 CDD:273330 111/599 (19%)
AA_permease_C 535..585 CDD:290617
SSY1NP_010444.1 2A0310 278..819 CDD:273334 108/593 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 90 1.000 Inparanoid score I1545
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100168
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.760

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