DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5535 and gb

DIOPT Version :10

Sequence 1:NP_649019.2 Gene:CG5535 / 39990 FlyBaseID:FBgn0036764 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_651536.1 Gene:gb / 43265 FlyBaseID:FBgn0039487 Length:517 Species:Drosophila melanogaster


Alignment Length:450 Identity:98/450 - (21%)
Similarity:180/450 - (40%) Gaps:82/450 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DSNESKLAKVLSAFDLTALGIGSTLGVGVYVLAGEVSKQY--AGPAVVVSFLIAAIASIFAGLCY 92
            ||:...:.|.|...:..|:.:|...|.|::|....|.::.  .|.::|: :::..:.|:...|||
  Fly    49 DSSRVVIKKQLGLLEGVAIILGIIFGSGIFVSPKGVIREVESVGASLVI-WVLCGLLSMIGALCY 112

  Fly    93 AEFGARVPKAGSAYIYSYVTIGEFIAFLIGWNLILEYAIGSASVVKGL--STYLDQLCGNPMSSF 155
            ||.|..:||:|..|.|.:...|...|||..|:.::.: :.:.:.:.||  ::|:       :..|
  Fly   113 AELGTAIPKSGGDYAYIFEAYGSLPAFLYLWDAMMIF-VPTTNAIMGLTFASYV-------LEPF 169

  Fly   156 LGTHMPLNIEGMGAYP----DLFAFVVTILFSLAIAVGAKESTRVNNVFTMLNLGVVLFVIIAGL 216
            .|        |....|    .|.|.:.....:...:...|.:|::.||.....:..::.:|:.||
  Fly   170 FG--------GACEIPKIALQLLAAITICFLTYLNSYYMKVTTKMQNVIMFTKIAALVLIILVGL 226

  Fly   217 FKV---SSSNWSIPKSQVPEGYGDGGFMPYGVSGIIKGAAVCFY----GFIGFDCIATAGEEAKN 274
            ..:   :..|::.|......   |.|.|           :|.||    .:.|::.:....||.::
  Fly   227 VWMMMGNVENFTRPFDNTET---DPGKM-----------SVAFYSGIFSYAGWNYLNFMTEELRD 277

  Fly   275 PKKSIPFAVIVSLAMIFLAYFGVSTVLTMMLPYFEQDEKAPLPHVF--RINGWH--VAEYVVSIG 335
            |.:::|.|:.:||.::...|...:.....:|...|......:...|  :|.|..  :...:|:|.
  Fly   278 PYRNLPRAIYISLPLVTGIYVLANVAYLAVLSPSEMIASNAIAVTFGDKILGVFSLIIPLMVAIS 342

  Fly   336 AMFGLCSSMMGAMFPLPRIVFAMSNDGLLFKFLGDISEKYKTPFKGTMITGMLTGILAAVFNLSQ 400
            |..||...:|.:    .||.|..:.:|.:...|..||.|..||....:....|:.::..|.::..
  Fly   343 AFGGLSVHIMTS----SRICFVGARNGHMPAILSHISVKSYTPLPSLVFLCFLSIVMLVVSDVYV 403

  Fly   401 LVNMMSIGTLLAYSMVASCVLMLRYEVDDRRESRIVANGRATGLEQDRPC-------ALW 453
            |:...||.......:..|.||..||                     .|||       |:|
  Fly   404 LITYASIVESFFIMLSVSAVLYFRY---------------------TRPCMERPIKVAMW 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5535NP_649019.2 2A0303 20..585 CDD:273330 97/449 (22%)
gbNP_651536.1 2A0308 32..515 CDD:273332 97/449 (22%)

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