DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5535 and slif

DIOPT Version :9

Sequence 1:NP_649019.2 Gene:CG5535 / 39990 FlyBaseID:FBgn0036764 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster


Alignment Length:586 Identity:307/586 - (52%)
Similarity:420/586 - (71%) Gaps:18/586 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VTNAFRVLTRKKPLEDSN--ESKLAKVLSAFDLTALGIGSTLGVGVYVLAGEVSKQYAGPAVVVS 77
            :||.::.|||:| .||.|  ||:||:||:.|||||||:|||||:|||||||:|:...|||||.:|
  Fly     1 MTNLWKALTRRK-TEDVNEGESQLARVLNLFDLTALGVGSTLGLGVYVLAGQVAFNIAGPAVTIS 64

  Fly    78 FLIAAIASIFAGLCYAEFGARVPKAGSAYIYSYVTIGEFIAFLIGWNLILEYAIGSASVVKGLST 142
            ||||||||.|||:|||||.||||||||||:|||||||||:||.|||||||||.||:|||.:|||.
  Fly    65 FLIAAIASAFAGICYAEFAARVPKAGSAYVYSYVTIGEFVAFTIGWNLILEYVIGTASVARGLSG 129

  Fly   143 YLDQLCGNPMSSFLGTHMPLNIEGMGAYPDLFAFVVTILFSLAIAVGAKESTRVNNVFTMLNLGV 207
            |.|.|..|.||..|...|.::::.:|.|||..:|.:.:|.:..:|.|||||:.:||:||.:||..
  Fly   130 YFDSLINNNMSKALNESMHIDVDFLGDYPDFLSFGMVLLLAAILAFGAKESSFLNNIFTTVNLVT 194

  Fly   208 VLFVIIAGLFKVSSSNWSIPKSQVPEGYGDGGFMPYGVSGIIKGAAVCFYGFIGFDCIATAGEEA 272
            :..|::||....:..||.|||..||||:|.|||||:|::|::.|||.|||||:|||||||.||||
  Fly   195 IAIVLVAGAMNANVDNWRIPKKDVPEGFGTGGFMPFGIAGVMAGAAKCFYGFVGFDCIATTGEEA 259

  Fly   273 KNPKKSIPFAVIVSLAMIFLAYFGVSTVLTMMLPYFEQDEKAPLPHVFRINGWHVAEYVVSIGAM 337
            .|||::||.:::|||.:|||:||||||||||||||::||:.||.||.|....|:..:::|:|||:
  Fly   260 INPKRNIPLSIVVSLIIIFLSYFGVSTVLTMMLPYYKQDKDAPFPHAFDSVEWYTIKWIVTIGAV 324

  Fly   338 FGLCSSMMGAMFPLPRIVFAMSNDGLLFKFLGDISEKYKTPFKGTMITGMLTGILAAVFNLSQLV 402
            |.||:|::|||||||||::||..||:|||.|..::...|||...|:::|:...|:|.:|||.|||
  Fly   325 FALCTSLLGAMFPLPRILYAMGKDGILFKRLSTVNSYTKTPLLATIVSGIFASIMAMLFNLDQLV 389

  Fly   403 NMMSIGTLLAYSMVASCVLMLRYEVDDRRESRIVANGRATGLEQDRPCALWRRIFNLNGQTVPTK 467
            :||||||||||::||.|||:|||:.::           .|.|...:...::|:.||.|....|..
  Fly   390 DMMSIGTLLAYTIVAICVLVLRYQDEE-----------MTKLVSVKAPNVFRQFFNGNSFREPNS 443

  Fly   468 QTSRIVTYSVTLFSLWCMVFSQILTKFEEDLANVTSFDGIKLVLGTIPLAVLLLVISRQPTSGVK 532
            .||.|....:.:|:::|:|:..:...|  ||.:......:.|| |.: |.::.:||..||.|.::
  Fly   444 MTSSITKVGIVVFAIFCLVWCSLQKVF--DLDSTGGIVALSLV-GAV-LILICVVIGMQPVSTIE 504

  Fly   533 LSFKVPLVPWLPGISILINIYLMIKLDILTWIRFSIWIAIGLAIFLAYGIRHSRLRQREQRNNSI 597
            |:|||||||::|.:|:..|:|||.:||:.|||||.|||.||..|:..||:|:|....|.:.:..:
  Fly   505 LTFKVPLVPFVPCLSVFANLYLMFQLDLNTWIRFLIWIVIGYVIYFCYGMRNSTQISRSRSHAEV 569

  Fly   598 A 598
            |
  Fly   570 A 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5535NP_649019.2 2A0303 20..585 CDD:273330 302/566 (53%)
AA_permease_C 535..585 CDD:290617 29/49 (59%)
slifNP_649428.1 2A0303 8..557 CDD:273330 302/564 (54%)
AA_permease_C 507..557 CDD:290617 29/49 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469328
Domainoid 1 1.000 307 1.000 Domainoid score I322
eggNOG 1 0.900 - - E2759_KOG1286
Homologene 1 1.000 - - H20658
Inparanoid 1 1.050 352 1.000 Inparanoid score I609
Isobase 1 0.950 - 0 Normalized mean entropy S2925
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D40603at33392
OrthoFinder 1 1.000 - - FOG0000131
OrthoInspector 1 1.000 - - mtm6524
orthoMCL 1 0.900 - - OOG6_100168
Panther 1 1.100 - - P PTHR43243
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2006
SonicParanoid 1 1.000 - - X81
1413.780

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