DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5535 and mnd

DIOPT Version :10

Sequence 1:NP_649019.2 Gene:CG5535 / 39990 FlyBaseID:FBgn0036764 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster


Alignment Length:564 Identity:129/564 - (22%)
Similarity:226/564 - (40%) Gaps:136/564 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 PLEDSNES----------KLAKVLSAFDLTALGIGSTLGVGVYV-------LAGEVSKQYAGPAV 74
            |.|.:|.:          ||.|.:...|..|:.:|..:|.|::|       .:|.:     |.::
  Fly    20 PAEPNNSTADSGSQGSGVKLKKQIGLLDGVAIIVGVIVGSGIFVSPKGVLKFSGSI-----GQSL 79

  Fly    75 VVSFLIAAIASIFAGLCYAEFGARVPKAGSAYIYSYVTIGEFIAFLIGW-NLILEYAIGSASVVK 138
            :| ::::.:.|:...|||||.|..:||:|..|.|.....|...|||..| .|::....|:|....
  Fly    80 IV-WVLSGVLSMVGALCYAELGTMIPKSGGDYAYIGTAFGPLPAFLYLWVALLILVPTGNAITAL 143

  Fly   139 GLSTYLDQ----LCGNPMSSFLGTHMPLNIEGMGAYPDLFAFVVTILFSLAIAVGAKESTRVNNV 199
            ..:.||.:    .|..|:.:.                .|.|..:..:.:|......|..|||.::
  Fly   144 TFAIYLLKPFWPSCDAPIEAV----------------QLLAAAMICVLTLINCYNVKWVTRVTDI 192

  Fly   200 FTMLNLGVVLFVIIAG---LFKVSSSNWSIPKSQVPEGYGDGGFMPYGVSGIIKGAAVCFY---- 257
            ||...:..:|.::.||   ||..::.:|..|.|   .|..|.|::           |:.||    
  Fly   193 FTGTKVVALLVIVGAGVWWLFDGNTEHWDNPFS---GGLQDPGYI-----------ALAFYSGLF 243

  Fly   258 GFIGFDCIATAGEEAKNPKKSIPFAVIVSLAMIFLAYFGVSTVLTMM--LPYF---EQDEKAPLP 317
            .:.|::.:....||.|:|.:::|.|:.:|:.::        ||:.|:  :.||   ..||.....
  Fly   244 SYSGWNYLNFVTEELKDPYRNLPKAICISMPVV--------TVIYMITNIAYFSVLSPDEILSSD 300

  Fly   318 HVFRINGWHVAEYVVSIGAMFGLCS---SMMGAMFPLPRIVFAMSNDGLLFKFLGDISEKYKTPF 379
            .|....|..:..|:..|......||   |:.||:|...|:.|..:.:|.|...:..|:....||.
  Fly   301 AVAVTFGDKMLGYMSWIMPFAVACSTFGSLNGAIFASSRLFFVGARNGHLPAAISLINVNCLTPV 365

  Fly   380 KGTMITGMLTGILAAVFNLSQLVNMMSIGTLLAYSMVASCVLMLRYEVDDRRESRIVANGRATGL 444
            ...:..|:||.:|..:.::..|:|.:|....|...:..|.:|.:||:..                
  Fly   366 PSLIFLGVLTLLLLFIEDVYVLINYVSYVEALFTLISVSGLLWMRYKQP---------------- 414

  Fly   445 EQDRPCALWRRIFNLNGQTVPTKQTSRIVTYSVTLFSLWCMVFSQILTKFEEDLANVTSFDGIKL 509
            :.:||..:     ||   .:|      |:...|.||   .::||...|.:...:..:       :
  Fly   415 KTERPIKV-----NL---ALP------IIYLIVCLF---LVIFSCTQTPYVVGIGTI-------I 455

  Fly   510 VLGTIPLAVLLLVISRQPTSGVKLSFKVPLVPWLPGISILINIY 553
            :|..||:..|.:   .:|            |.||...|..||::
  Fly   456 ILSGIPVYYLTI---HKP------------VKWLADTSQAINLW 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5535NP_649019.2 2A0303 20..585 CDD:273330 129/564 (23%)
mndNP_524074.1 2A0308 22..496 CDD:273332 128/562 (23%)

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