DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5535 and cat1

DIOPT Version :10

Sequence 1:NP_649019.2 Gene:CG5535 / 39990 FlyBaseID:FBgn0036764 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_595008.3 Gene:cat1 / 2543573 PomBaseID:SPAC869.11 Length:587 Species:Schizosaccharomyces pombe


Alignment Length:585 Identity:118/585 - (20%)
Similarity:208/585 - (35%) Gaps:146/585 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KPLEDSNE--SKLAKVLSAFDLTALGIGSTLGVGVYVLAGEVSKQYAGPA-VVVSFLIAAIASIF 87
            ||.:.:.|  :.|.:.|.:..:..:.||..:|.|:||.:|. |....||| |::::.:..|...|
pombe    68 KPAKATGEDGTALKRSLKSRHMQMISIGGAIGTGLYVGSGS-SLADGGPASVIINYSLIGIMMFF 131

  Fly    88 AGLCYAEFGARVPKAGSAYIYSYVTIGEFIAFLIGWNLILEYAIGSASVVKGLST-------YLD 145
            ......|.....|.||....|:...|.....|.:.||..:.|.:   :....|:|       :.|
pombe   132 IVYALGEMAVAYPVAGGFNTYATRFIDPAWGFAVSWNYFINYFV---TFPLELTTCAITFRYWTD 193

  Fly   146 QLCGNPMSSFLGTHMPLNIEGMGAYPDLFAFVVTILFSLAIAVGAKESTRVNNVFTMLNLGVVLF 210
            ......:|.||...:.:|:.|:.||.:: .|:                  ::.|..:...|.::.
pombe   194 INSAAWISIFLVVIIIVNLFGVRAYGEV-EFI------------------LSTVKVVATFGFIIL 239

  Fly   211 VIIAGLFKVSSSNWSIPKSQVPEGYGDGGFMP-----YGVSGIIKGAAVCFYGFIGFDCIATAGE 270
            .||.....|.:.:         .||..|..:.     :|..|.........:.|.|.:.|..|..
pombe   240 AIIINCGGVPTDH---------RGYIGGSIIKHKPFRHGFKGFCSVFTTAAFSFSGTEVIGLAAA 295

  Fly   271 EAKNPKKSIPFAV-----------IVSLAMIFLAYF---------GVSTVLTMMLPYFEQDEKAP 315
            |..||:|::|.||           :|||.:|.|...         |.::|...:|...|.:.|. 
pombe   296 EVDNPQKALPHAVKQVFWRIAIFYVVSLILIGLLISPDDPNLMGNGSTSVSPFVLAIKEANIKG- 359

  Fly   316 LPHVFRINGWHVAEYVVSI------------GAMFGLCSSMMGAMF---------PLPRIVFAMS 359
            ||.||.      |..::|:            ..:.|:.:......|         ||..::..  
pombe   360 LPSVFN------AVIIISVVSVTNSSTYTAGRTLHGMANLKQAPSFFKYTDRLGRPLLAMIVV-- 416

  Fly   360 NDGLLFKFLGDISEKYKTPFKGTMITGMLTGILAAVFN----LSQLVNMMSIGTLLAYSMVASCV 420
               |||.|...|:|..|   .|..::.       .|||    ||.|.|..:.|::        |:
pombe   417 ---LLFGFFAYINEADK---NGNDVSD-------TVFNWLLALSGLSNFFTWGSI--------CL 460

  Fly   421 LMLRYEVDDRRESRIVAN----------GRATGLEQDRPCAL---WRRIFNLNGQTVPTKQTSRI 472
            ..:.:.:..:::...:..          |...||..:..|.:   :..:|.:.|:..........
pombe   461 CHIIFRLAFKKQGHSLKELGFVSPMGIWGSCIGLFFNILCLMAQFYVSLFPIGGKPNANDFFQGY 525

  Fly   473 VTYSVTL-FSLWCMVFSQILTKFEEDLANVTSFDGIKLVLGTIPLAVLLLVISRQPTSGVKLSFK 536
            :...||| |.:...::         |.:::.|.|.:.:..| :.....|.....:||:..|..||
pombe   526 LAAPVTLAFFIGYKIY---------DRSHIPSLDKLDITTG-LKTYENLDEEEDEPTTASKRIFK 580

  Fly   537  536
            pombe   581  580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5535NP_649019.2 2A0303 20..585 CDD:273330 118/585 (20%)
cat1NP_595008.3 AA_permease_2 81..555 CDD:459263 107/544 (20%)

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