DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5535 and cat1

DIOPT Version :9

Sequence 1:NP_649019.2 Gene:CG5535 / 39990 FlyBaseID:FBgn0036764 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_595008.3 Gene:cat1 / 2543573 PomBaseID:SPAC869.11 Length:587 Species:Schizosaccharomyces pombe


Alignment Length:581 Identity:118/581 - (20%)
Similarity:209/581 - (35%) Gaps:138/581 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KPLEDSNE--SKLAKVLSAFDLTALGIGSTLGVGVYVLAGEVSKQYAGPA-VVVSFLIAAIASIF 87
            ||.:.:.|  :.|.:.|.:..:..:.||..:|.|:||.:|. |....||| |::::.:..|...|
pombe    68 KPAKATGEDGTALKRSLKSRHMQMISIGGAIGTGLYVGSGS-SLADGGPASVIINYSLIGIMMFF 131

  Fly    88 AGLCYAEFGARVPKAGSAYIYSYVTIGEFIAFLIGWNLILEYAIGSASVVKGLST-------YLD 145
            ......|.....|.||....|:...|.....|.:.||..:.|.:   :....|:|       :.|
pombe   132 IVYALGEMAVAYPVAGGFNTYATRFIDPAWGFAVSWNYFINYFV---TFPLELTTCAITFRYWTD 193

  Fly   146 QLCGNPMSSFLGTHMPLNIEGMGAYPDLFAFVVTILFSLAIAVGAKESTRVNNVFTMLNLGVVLF 210
            ......:|.||...:.:|:.|:.||.:: .|:                  ::.|..:...|.::.
pombe   194 INSAAWISIFLVVIIIVNLFGVRAYGEV-EFI------------------LSTVKVVATFGFIIL 239

  Fly   211 VIIAGLFKVSSSNWSIPKSQVPEGYGDGGFMP-----YGVSGIIKGAAVCFYGFIGFDCIATAGE 270
            .||.....|.:.:         .||..|..:.     :|..|.........:.|.|.:.|..|..
pombe   240 AIIINCGGVPTDH---------RGYIGGSIIKHKPFRHGFKGFCSVFTTAAFSFSGTEVIGLAAA 295

  Fly   271 EAKNPKKSIPFAV-----------IVSLAMIFLAYF---------GVSTVLTMMLPYFEQDEKAP 315
            |..||:|::|.||           :|||.:|.|...         |.::|...:|...|.:.|. 
pombe   296 EVDNPQKALPHAVKQVFWRIAIFYVVSLILIGLLISPDDPNLMGNGSTSVSPFVLAIKEANIKG- 359

  Fly   316 LPHVFRINGWHVAEYVVSIGAMFGLCSSMMGAMFPLPRIVFAMSN---DGLLFKFLGDISEKYKT 377
            ||.||.      |..::|:      .|....:.:...|.:..|:|   ....||:    :::...
pombe   360 LPSVFN------AVIIISV------VSVTNSSTYTAGRTLHGMANLKQAPSFFKY----TDRLGR 408

  Fly   378 PFKGTMITGMLTGILA--------------AVFN----LSQLVNMMSIGTLLAYSMVASCVLMLR 424
            |.. .||..:|.|..|              .|||    ||.|.|..:.|::        |:..:.
pombe   409 PLL-AMIVVLLFGFFAYINEADKNGNDVSDTVFNWLLALSGLSNFFTWGSI--------CLCHII 464

  Fly   425 YEVDDRRESRIVAN----------GRATGLEQDRPCAL---WRRIFNLNGQTVPTKQTSRIVTYS 476
            :.:..:::...:..          |...||..:..|.:   :..:|.:.|:..........:...
pombe   465 FRLAFKKQGHSLKELGFVSPMGIWGSCIGLFFNILCLMAQFYVSLFPIGGKPNANDFFQGYLAAP 529

  Fly   477 VTL-FSLWCMVFSQILTKFEEDLANVTSFDGIKLVLGTIPLAVLLLVISRQPTSGVKLSFK 536
            ||| |.:...::         |.:::.|.|.:.:..| :.....|.....:||:..|..||
pombe   530 VTLAFFIGYKIY---------DRSHIPSLDKLDITTG-LKTYENLDEEEDEPTTASKRIFK 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5535NP_649019.2 2A0303 20..585 CDD:273330 118/581 (20%)
AA_permease_C 535..585 CDD:290617 2/2 (100%)
cat1NP_595008.3 LysP 40..580 CDD:223903 116/579 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2006
SonicParanoid 1 1.000 - - X81
TreeFam 00.000 Not matched by this tool.
43.940

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