DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5535 and F23F1.6

DIOPT Version :9

Sequence 1:NP_649019.2 Gene:CG5535 / 39990 FlyBaseID:FBgn0036764 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_493642.1 Gene:F23F1.6 / 184903 WormBaseID:WBGene00017747 Length:583 Species:Caenorhabditis elegans


Alignment Length:607 Identity:232/607 - (38%)
Similarity:343/607 - (56%) Gaps:89/607 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VLTRKKPLEDSN--ESKLAKVLSAFDLTALGIGSTLGVGVYVLAGEVSKQYAGPAVVVSFLIAAI 83
            ||.|||..:..:  ||::.:.|:..|:..:.||..:|.|:|||.|.|.:..||||:::||:.:..
 Worm     9 VLFRKKTFDGGSHLESQMKRCLTILDVMFIAIGHMIGAGIYVLTGSVVRNQAGPAIILSFIFSGF 73

  Fly    84 ASIFAGLCYAEFGARVPKAGSAYIYSYVTIGEFIAFLIGWNLILEYAIGSASVVKGLSTYLDQLC 148
            |::.:...|||||||.|:|||||.||||.:||..||::||.:.|||.||:|:|.:..|.|.|.|.
 Worm    74 AALLSAFSYAEFGARFPRAGSAYTYSYVGMGEIWAFIVGWTVPLEYMIGNAAVARSWSAYFDNLV 138

  Fly   149 GNPMSSF-LGTHMPLNIEGMG---AYPDLFAFVVTILFSLAIAVGAKESTRVNNVFTMLNLGVVL 209
            ...:|:: |.|...|: :|.|   .|||..||.:..|.::|:|:|:|.|..||..|..|||.|:.
 Worm   139 SKSVSNWTLDTVGRLS-DGKGFFALYPDFLAFFLLFLVAVAVAMGSKFSANVNTSFVFLNLAVLA 202

  Fly   210 FVIIAGLFKVSSSNWSIPKSQVPEGYGDG--GFMPYGVSGIIKGAAVCFYGFIGFDCIATAGEEA 272
            ||||.||.....|.||       ..|.||  .|.|||:.|.|.||:.||:.||||:.:|||||||
 Worm   203 FVIICGLTYADFSLWS-------GTYQDGRSKFFPYGIQGAISGASTCFFAFIGFEALATAGEEA 260

  Fly   273 KNPKKSIPFAVIVSLAMIFLAYFGVSTVLTMMLPYFEQDEKAPLPHVFRINGWHVAEYVVSIGAM 337
            |||.::||.|...|||:|.:.|..:...||:|:||...|..|.....|.:.|..||:.::|:||:
 Worm   261 KNPHRTIPLATFTSLAIISVIYVLMGASLTLMIPYDLVDPDAAFAAAFEMKGATVAKIIMSVGAL 325

  Fly   338 FGLCSSMMGAMFPLPRIVFAMSNDGLLFKFLGDISEKYKTPFKGTMITGMLTGILAAVFNLSQLV 402
            .|:.::::...|.|||.|:||::|||:|.:.|.|:.|.|||...|::..::..|||.||:|..||
 Worm   326 AGMLNNLVTGSFALPRAVYAMADDGLIFGWFGVINSKTKTPLNATIVFTIINAILALVFDLQALV 390

  Fly   403 NMMSIGTLLAYSMVASCVLMLRYEVDDRRESRIVANGRATGLEQDRPCALWRRIFNLNGQTVPTK 467
            :.:|||||||||||:.||::||:      :|.:| :|.||..:.......|          ||  
 Worm   391 DFLSIGTLLAYSMVSICVIILRH------QSHLV-DGSATDYDNGGCLKSW----------VP-- 436

  Fly   468 QTSRIVTYSVTLFSLWCMVFSQILTKFEEDLANVTSFDGIKLVLGTIPLA-------------VL 519
                               |..:...|.|.::...:..|  |:.|.|.||             ::
 Worm   437 -------------------FQGVWENFSEGISIRVAVAG--LIFGYICLAIPFRTGIFSNAGGII 480

  Fly   520 LLVI----------------SRQPTSGVKLSFKVPLVPWLPGISILINIYLMIKLDILTWIRFSI 568
            ||.:                ..:.||    ::||||||::|.:.:|||:::|:.|:.:||||..:
 Worm   481 LLTVGAAFSLLSFVFILGHEQNKSTS----TYKVPLVPFIPCLGLLINVFMMVYLNSMTWIRLFV 541

  Fly   569 WIAIGLAIFLAYGIRHSRLRQR 590
            |:|||:.|::.||||||:..|:
 Worm   542 WLAIGIVIYICYGIRHSKEGQK 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5535NP_649019.2 2A0303 20..585 CDD:273330 229/600 (38%)
AA_permease_C 535..585 CDD:290617 25/49 (51%)
F23F1.6NP_493642.1 2A0303 1..560 CDD:273330 231/602 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165416
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 1 1.010 - - D439017at2759
OrthoFinder 1 1.000 - - FOG0000131
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100168
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X81
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.660

Return to query results.
Submit another query.