DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5535 and aat-3

DIOPT Version :10

Sequence 1:NP_649019.2 Gene:CG5535 / 39990 FlyBaseID:FBgn0036764 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001300351.1 Gene:aat-3 / 180557 WormBaseID:WBGene00000004 Length:529 Species:Caenorhabditis elegans


Alignment Length:435 Identity:100/435 - (22%)
Similarity:194/435 - (44%) Gaps:72/435 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RKKPL--EDSNE--------SKLAKVLSAFDLTALGIGSTLGVGVYVLAGEVSKQYAGPAVVVSF 78
            :.:||  |.|||        ..|.|.::.|:..::.:|..:|.|:::....:..| || :|.:|.
 Worm    42 QSEPLNQEPSNEHHDEEVGDKGLEKTMTLFNGVSIIVGCIIGSGIFISPTGIQAQ-AG-SVGLSL 104

  Fly    79 LIAAIASIFAGL---CYAEFGARVPKAGSAYIYSYVTIGEFIAFLIGWNLILEYAIGSASVVKGL 140
            ::..::.:|||:   ||||.|..:.|:|..|.|.....|.|:|||..|...:.....:|::| .|
 Worm   105 IVWVLSGLFAGIGAFCYAELGTLIRKSGGDYAYIMEAFGPFLAFLRLWIESIVVRPCTATIV-AL 168

  Fly   141 STYLDQL------CGNPMSSFLGTHMPLNIEGMGAYPDLFAFVVTILFSLAIAVGAKESTRVNNV 199
            :..:..|      |.:|         ||:.|       |.|.::.:|.:....:..|.:::|.:.
 Worm   169 TFAIYMLKPFYPDCDSP---------PLSTE-------LIAALLLVLLTAVNCISVKWASKVQDF 217

  Fly   200 FTMLNLGVVLFVIIAGLFKVSSSNWSIPKSQVPEGYGDGGFMPYGVSGIIKGAAVCFY----GFI 260
            |.:.....::.:|..||:.:.|..        ||.:.....:....:..::.|::.||    .:.
 Worm   218 FFVTKTAALVLIIFTGLWNMVSGK--------PEAFDSFENIFENTAKDLETASLAFYSGLFAYQ 274

  Fly   261 GFDCIATAGEEAKNPKKSIPFAVIVSLAMIFLAYFGVSTVL-TMMLPYFEQDEKAPLPHVF---- 320
            |::.:....||.:|||:::|.::.:|.::..:.|...:..| |.:.|    ||....|.|.    
 Worm   275 GWNYLNFIVEELQNPKRNLPLSIAISCSLCTIIYTLTNVALYTSITP----DEMLASPAVAVLFA 335

  Fly   321 -RINGWHVAEYVVSIGAMFGLCS---SMMGAMFPLPRIVFAMSNDGLLFKFLGDISEKYKTPFKG 381
             :..||..  :.:.|   |..||   |..|.:....|:.:..:.:|.:...|..:::..|||...
 Worm   336 EKNYGWFA--FCMPI---FVACSTIGSANGVILTSSRLFYCGAREGQMPNVLTMVNKTTKTPIPA 395

  Fly   382 TMITGMLTGI-LAAVFNLSQLVNMMSIGTLLAYSMVASCVLMLRY 425
            .::||:|:.: |....|:..|:|.:.:...:|   :...:|.|.|
 Worm   396 VILTGLLSLLYLLLSNNIYSLINYIQVSYWIA---IGGAILALFY 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5535NP_649019.2 2A0303 20..585 CDD:273330 100/435 (23%)
aat-3NP_001300351.1 2A0308 40..527 CDD:273332 100/435 (23%)

Return to query results.
Submit another query.