DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrpRS-m and trpS

DIOPT Version :10

Sequence 1:NP_649018.2 Gene:TrpRS-m / 39989 FlyBaseID:FBgn0036763 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_417843.1 Gene:trpS / 947894 ECOCYCID:EG11030 Length:334 Species:Escherichia coli


Alignment Length:333 Identity:146/333 - (43%)
Similarity:204/333 - (61%) Gaps:19/333 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 VFSGIQPTGSLHLGNYLGAVRKWVQLQNARDD--VTVCIVDLHSITMPHNPPLLRENIFTMAATL 144
            ||||.||:|.|.:|||:||:|:||.:|   ||  ...||||.|:||:..:...||:......|..
E. coli     6 VFSGAQPSGELTIGNYMGALRQWVNMQ---DDYHCIYCIVDQHAITVRQDAQKLRKATLDTLALY 67

  Fly   145 LACGIDPTKSTLFVQSAVAEHAEFNWILSSLTTMPRLAQLPQFREKS-RLLKDVPLGLYVYPVLQ 208
            |||||||.|||:||||.|.|||:..|.|:..|....|:::.||::|| |..:::..||:.||||.
E. coli    68 LACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFGELSRMTQFKDKSARYAENINAGLFDYPVLM 132

  Fly   209 AADIMLYKSTHVPVGADQIQHIQLAQHLARIYNGRYGETFPVCTAIIEDGDASRVLSLRDPSKKM 273
            ||||:||::..||||.||.||::|::.:|:.:|..|||.|.|....|....| ||:||.:|:|||
E. coli   133 AADILLYQTNLVPVGEDQKQHLELSRDIAQRFNALYGEIFKVPEPFIPKSGA-RVMSLLEPTKKM 196

  Fly   274 SKSEANPKATINLCDSPDLITQKIKKAVTDFTSD----ITYNPGKRAGVSNLVNIHAQVTGQSIK 334
            |||:.|....|.|.:.|..:.:|||:||||  ||    :.|:...:||||||::|.:.||||||.
E. coli   197 SKSDDNRNNVIGLLEDPKSVVKKIKRAVTD--SDEPPVVRYDVQNKAGVSNLLDILSAVTGQSIP 259

  Fly   335 TVVNEAATLDTAKYKDRVAEAVVEHLRPIREQIHHHMTKRNEMIYLLEV---GAEKARQQARQTL 396
            .:..:.........|..||:||...|..::|:.|..   ||:..:|.:|   |||||...|.:||
E. coli   260 ELEKQFEGKMYGHLKGEVADAVSGMLTELQERYHRF---RNDEAFLQQVMKDGAEKASAHASRTL 321

  Fly   397 NDVKQRLG 404
            ..|.:.:|
E. coli   322 KAVYEAIG 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpRS-mNP_649018.2 PRK00927 82..406 CDD:234866 146/333 (44%)
trpSNP_417843.1 PRK00927 3..333 CDD:234866 146/333 (44%)

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