DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrpRS-m and OVA4

DIOPT Version :9

Sequence 1:NP_001262001.1 Gene:TrpRS-m / 39989 FlyBaseID:FBgn0036763 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_973533.1 Gene:OVA4 / 817126 AraportID:AT2G25840 Length:412 Species:Arabidopsis thaliana


Alignment Length:343 Identity:131/343 - (38%)
Similarity:206/343 - (60%) Gaps:20/343 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 RKVFSGIQPTGSLHLGNYLGAVRKWVQLQNARDDVTVCIVDLHSITMPHNPPLLRENIFTMAATL 144
            ::|.||:|||||:||||||||::.||.||:..:.:.: |||.|:||:|::...|.:.....||..
plant    65 KRVVSGVQPTGSVHLGNYLGAIKNWVALQDTYETLFI-IVDHHAITLPYDTRQLGKATTDTAALY 128

  Fly   145 LACGIDPTKSTLFVQSAVAEHAEFNWILSSLTTMPRLAQLPQFREKSRL--LKDVPLGLYVYPVL 207
            ||||||.:|:::||||.|..|.|..|:|.|.|.:..|.::.||:||||.  :::..:||:.||.|
plant   129 LACGIDVSKASVFVQSHVPAHVELMWLLCSSTPIGWLQKMIQFKEKSRKEGVENASVGLFTYPDL 193

  Fly   208 QAADIMLYKSTHVPVGADQIQHIQLAQHLAR----IYNG------------RYGETFPVCTAIIE 256
            ..|||:||:|..||||.||.|||:||:.:|:    :|.|            |.|..|.:...:|.
plant   194 MTADILLYQSDFVPVGEDQKQHIELAREIAQRVNHLYGGKKWKKLGGYEIFRGGSLFKIPEPLIP 258

  Fly   257 DGDASRVLSLRDPSKKMSKSEANPKATINLCDSPDLITQKIKKAVTDFTSDITYNPGKRAGVSNL 321
            ...| ||:||.|...|||||..:.::.|||.||.|||..|||:..||..:.:.::..:|...:||
plant   259 QAGA-RVMSLTDGLSKMSKSAPSDQSRINLLDSKDLIVDKIKRCKTDSFAGLEFDNAERPECNNL 322

  Fly   322 VNIHAQVTGQSIKTVVNEAATLDTAKYKDRVAEAVVEHLRPIREQIHHHMTKRNEMIYLLEVGAE 386
            ::|:..|:|:..:.|:.|...:....:|..:|:|::|||.||:.:....:.:...:..:|..||:
plant   323 LSIYQIVSGKKKEEVMEECKDMSWGTFKPLLADALIEHLSPIQARYQEIIAEPEYLDKILSEGAD 387

  Fly   387 KARQQARQTLNDVKQRLG 404
            :|.:....|:.::.|.:|
plant   388 RAEELGAVTMRNMYQAMG 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpRS-mNP_001262001.1 PRK00927 82..406 CDD:234866 131/341 (38%)
TrpRS_core 82..359 CDD:173903 119/294 (40%)
OVA4NP_973533.1 PLN02886 19..411 CDD:215478 131/343 (38%)
PRK00927 64..409 CDD:234866 131/343 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 214 1.000 Domainoid score I770
eggNOG 1 0.900 - - E1_COG0180
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5673
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003309
OrthoInspector 1 1.000 - - oto4063
orthoMCL 1 0.900 - - OOG6_101334
Panther 1 1.100 - - LDO PTHR43766
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2207
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.770

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