DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrpRS-m and Wars2

DIOPT Version :9

Sequence 1:NP_001262001.1 Gene:TrpRS-m / 39989 FlyBaseID:FBgn0036763 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_001162112.1 Gene:Wars2 / 690654 RGDID:1593417 Length:360 Species:Rattus norvegicus


Alignment Length:386 Identity:179/386 - (46%)
Similarity:245/386 - (63%) Gaps:29/386 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 AVYSQRRCIQARSFLPGLASRTAGTPSATAQVTGGNKQHVHPHGNSVNSGHEEHNTRWPRKVFSG 85
            |::|.|:..:...|:..|..    .|:|||.          |...|            ..:||||
  Rat     2 ALFSVRKARECWRFIRALHK----GPTATAA----------PQKES------------GERVFSG 40

  Fly    86 IQPTGSLHLGNYLGAVRKWVQLQNARDDVTVCIVDLHSITMPHNPPLLRENIFTMAATLLACGID 150
            |||||..||||||||:..||:||...|.|...||||||||:|.:|.:|:::|..|.|.|||||||
  Rat    41 IQPTGIPHLGNYLGAIESWVKLQEEYDTVIYSIVDLHSITVPQDPGILQQSILDMTAVLLACGID 105

  Fly   151 PTKSTLFVQSAVAEHAEFNWILSSLTTMPRLAQLPQFREK-SRLLKDVPLGLYVYPVLQAADIML 214
            |.:|.||.||.|:||.:.:|||:.:..:|||..|.|::.| :|...|..:||..|||||||||:.
  Rat   106 PERSILFQQSQVSEHTQLSWILTCMVRLPRLQHLHQWKAKAARQKHDGTVGLLTYPVLQAADILC 170

  Fly   215 YKSTHVPVGADQIQHIQLAQHLARIYNGRYGETFPVCTAIIEDGDASRVLSLRDPSKKMSKSEAN 279
            |||||||||.||:||::|.|.|||.:|.:|||.||:..:|:.  ...:|.||||||.|||||:.:
  Rat   171 YKSTHVPVGEDQVQHMELVQDLARSFNQKYGELFPLPRSILT--SMKKVKSLRDPSAKMSKSDPD 233

  Fly   280 PKATINLCDSPDLITQKIKKAVTDFTSDITYNPGKRAGVSNLVNIHAQVTGQSIKTVVNEAATLD 344
            ..||:.:.|||:.|.:|.:||||||||::||.|..|.||||:|.|||.|:|.|::.||..:|.:|
  Rat   234 KLATVQITDSPEEIVRKFRKAVTDFTSEVTYEPDSRPGVSNMVAIHAAVSGLSVEEVVRNSAGVD 298

  Fly   345 TAKYKDRVAEAVVEHLRPIREQIHHHMTKRNEMIYLLEVGAEKARQQARQTLNDVKQRLGL 405
            ||:||..||:||:|...|||.:|......::.:..:|.||:.||::.|.....:||:.:|:
  Rat   299 TARYKLLVADAVIEKFAPIRSEIEKLKMDKDHLRKVLLVGSAKAKELASPVFEEVKKLVGI 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpRS-mNP_001262001.1 PRK00927 82..406 CDD:234866 168/325 (52%)
TrpRS_core 82..359 CDD:173903 154/277 (56%)
Wars2NP_001162112.1 PRK00927 35..360 CDD:234866 168/327 (51%)
TrpRS_core 36..312 CDD:173903 154/277 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341920
Domainoid 1 1.000 306 1.000 Domainoid score I1314
eggNOG 1 0.900 - - E1_COG0180
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H5673
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003309
OrthoInspector 1 1.000 - - oto95443
orthoMCL 1 0.900 - - OOG6_101334
Panther 1 1.100 - - LDO PTHR43766
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2207
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.700

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