DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrpRS-m and Wars1

DIOPT Version :9

Sequence 1:NP_001262001.1 Gene:TrpRS-m / 39989 FlyBaseID:FBgn0036763 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_001013188.2 Gene:Wars1 / 314442 RGDID:1308278 Length:475 Species:Rattus norvegicus


Alignment Length:382 Identity:77/382 - (20%)
Similarity:139/382 - (36%) Gaps:126/382 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 HPHGNSVNSGHEEHNTRWPRKVFSGIQPTG-SLHLGNYLGAV-RKWVQ--------LQNARD--- 112
            |...|.:...:|   .:.|..:::|..|:. ::|||:.:..: .||:|        :|.:.|   
  Rat   144 HRDMNQILDAYE---NKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFDVPLVIQMSDDEKY 205

  Fly   113 ---DVTVCIVDLHSITMPHNPPLLRENIFTMAATLLACGIDPTKSTLFVQSAVAEHAEFNWILSS 174
               |:|  :...:|.|:        ||    |..::|||.|..|:.:|                 
  Rat   206 LWKDLT--LEQAYSYTV--------EN----AKDIIACGFDVNKTFIF----------------- 239

  Fly   175 LTTMPRLAQLPQF-REKSRLLKDVP---------------LGLYVYPVLQAA------------- 210
             :.:..:.|.|.| :...::.|.|.               :|...:|.:|||             
  Rat   240 -SDLEYMGQSPGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRD 303

  Fly   211 --DIMLYKSTHVPVGADQIQHIQLAQHLARIYNGRYGETFPVCTAIIEDGDASRVLSLRDPSKKM 273
              ||...    :|...||..:.::.:.:|    .|.|...|   |::.   ::...:|:....||
  Rat   304 RTDIQCL----IPCAIDQDPYFRMTRDVA----PRIGHPKP---ALLH---STFFPALQGAQTKM 354

  Fly   274 SKSEANPKATINLCDSPDLITQKIKKAVTDFTSDITYNPGKRAGVSNLVNIH------------- 325
            |.|:  |.::|.|.|:...|..|:.|......|| |....::.|.:..|::.             
  Rat   355 SASD--PNSSIFLTDTAKQIKSKVNKHAFSGGSD-TVEEHRQFGGNCEVDVSFMYLTFFLEDDDS 416

  Fly   326 -----------AQVTGQSIKTVVNEAATL---DTAKYKDRVAEAVVEHLRPIREQIH 368
                       |.:||:..||:::....|   ..|:.|....|.|.|.:.|.:...|
  Rat   417 LEQIRKDYTSGAMLTGELKKTLIDVLQPLIAEHQARRKAVTEETVKEFMAPRQLSFH 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpRS-mNP_001262001.1 PRK00927 82..406 CDD:234866 73/361 (20%)
TrpRS_core 82..359 CDD:173903 70/350 (20%)
Wars1NP_001013188.2 WHEP-TRS 16..68 CDD:278865
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..85
PLN02486 89..470 CDD:178104 76/377 (20%)
trpS 158..467 CDD:272975 72/357 (20%)
'HIGH' region 168..177 3/8 (38%)
'KMSKS' region 353..357 3/3 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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