DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrpRS-m and prx-10

DIOPT Version :9

Sequence 1:NP_001262001.1 Gene:TrpRS-m / 39989 FlyBaseID:FBgn0036763 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_001379766.1 Gene:prx-10 / 175719 WormBaseID:WBGene00006946 Length:360 Species:Caenorhabditis elegans


Alignment Length:358 Identity:142/358 - (39%)
Similarity:212/358 - (59%) Gaps:31/358 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 VNSGHEEHNTR------WPRKVFSGIQPTGSLHLGNYLGAVRKWVQLQNARDD---VTVCIVDLH 122
            :|.|.:.:|.|      .|...|:||||||..||||:.|::..|.:|||:.|.   :.:.:||.|
 Worm    12 LNYGFKPNNLRLLSTSTHPTIYFTGIQPTGIPHLGNFFGSIEPWTELQNSVDKNILMMLSVVDQH 76

  Fly   123 SIT---MPHNPPLLRENIFTMAATLLACGIDPTKSTLFVQSAVAEHAEFNWILSSLTTMPRLAQL 184
            :|:   :|.|.  ||:|...|.|:|:|||:||.::.||.||.|.:.|:.:|||.||.|..:||:|
 Worm    77 AISLGPLPANE--LRQNTHQMTASLIACGVDPNRTLLFRQSDVPQIAQISWILGSLQTTSKLARL 139

  Fly   185 PQFREKSRLLK--DVPLGLYVYPVLQAADIMLYKSTHVPVGADQIQHIQLAQHLARIYNGRY-GE 246
            ||::||....|  |:|:||..||:|||||::.:|:|.||||.||.||:.|...||..:|..| .|
 Worm   140 PQYKEKKERFKKGDIPVGLLTYPLLQAADVLTFKATTVPVGEDQSQHLNLLGGLAYAFNKTYETE 204

  Fly   247 TFPVCTAIIEDGDASRVLSLRDPSKKMSKSEANPKATINLCDSPDLITQKIKKAVTDFTSDITYN 311
            .||:...:..:..| |:.|||:|.||||||...|::.|.:.||...|.:|.:||.:|....:||:
 Worm   205 IFPIPKQLTRESHA-RIRSLREPEKKMSKSSGGPRSRIEITDSRSTIIEKCQKAQSDNAGKVTYD 268

  Fly   312 PGKRAGVSNLVNIHAQVTGQSIKTVVNEA-----ATLDTAKYKDRVAEAVVEHLRPIREQIHHHM 371
            ...|..||||:::::.||    ||..:|.     .|||   .|..:||||.:.|.|||::. ..:
 Worm   269 KENRLAVSNLLDLYSAVT----KTQTSEIDFSNWTTLD---LKMNLAEAVDKRLAPIRQKF-EEL 325

  Fly   372 TKRNEMIYLLEVGAEKARQQARQTLNDVKQRLG 404
            ....|:..:|....||||:.|.:.|.::::.:|
 Worm   326 QNTGEVDKVLTENGEKAREIAEKNLEEIRRTIG 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpRS-mNP_001262001.1 PRK00927 82..406 CDD:234866 137/337 (41%)
TrpRS_core 82..359 CDD:173903 124/290 (43%)
prx-10NP_001379766.1 PRK00927 34..360 CDD:234866 137/336 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159996
Domainoid 1 1.000 212 1.000 Domainoid score I1612
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H5673
Inparanoid 1 1.050 233 1.000 Inparanoid score I2164
Isobase 1 0.950 - 0 Normalized mean entropy S1214
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003309
OrthoInspector 1 1.000 - - oto18451
orthoMCL 1 0.900 - - OOG6_101334
Panther 1 1.100 - - LDO PTHR43766
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2207
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.840

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