DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7430 and mtLPD2

DIOPT Version :9

Sequence 1:NP_001262000.1 Gene:CG7430 / 39988 FlyBaseID:FBgn0036762 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_566570.3 Gene:mtLPD2 / 820984 AraportID:AT3G17240 Length:507 Species:Arabidopsis thaliana


Alignment Length:472 Identity:272/472 - (57%)
Similarity:341/472 - (72%) Gaps:5/472 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SSTHEADIVVIGSGPGGYVAAIKAAQMGMKTVSVEKEATLGGTCLNVGCIPSKALLNNSHYYHMA 97
            |.:.:.|:|:||.|||||||||||||:|:||..:||...|||||||||||||||||::||.||.|
plant    39 SGSDDNDVVIIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEA 103

  Fly    98 -HSGDLEKRGISCGSVSLDLEKLMGQKSNAVKALTGGIAMLFKKNKVTQLTGFGTIVNPNEVEVK 161
             |.  ....|:...||.:||..::.||..|||.||.|:..|||||||..:.|:|..::|:||.|.
plant   104 KHV--FANHGVKVSSVEVDLPAMLAQKDTAVKNLTRGVEGLFKKNKVNYVKGYGKFLSPSEVSVD 166

  Fly   162 KSDGSTETVKTKNILIATGSEVTPFPGIEIDEEVIVSSTGALKLAKVPKHLVVIGAGVIGLELGS 226
            ..||....||.|:|::||||:|...|||.|||:.||||||||.|.::||.|:|||||.||||:||
plant   167 TIDGENVVVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGALSLTEIPKKLIVIGAGYIGLEMGS 231

  Fly   227 VWSRLGAEVTAIEFMDTIGGVGIDNEVSKTFQKVLTKQGLKFKLGTKVTAASRSGDNVTVSVENA 291
            ||.|||:|||.:||...| ...:|.|:.|.||:.|.||.:||.|.|||.....|||.|.:.||.|
plant   232 VWGRLGSEVTVVEFAADI-VPAMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDSSGDGVKLIVEPA 295

  Fly   292 KSGEKEEIQCDALLVSVGRRPYTEGLGLEAVGIVKDDRGRIPVNATFQTVVPNIYAIGDCIHGPM 356
            :.||:..::.|.:|||.||.|:|.||.||.:|:..|..|||.||..|.|.|..:|||||.|.|||
plant   296 EGGEQTTLEADVVLVSAGRTPFTSGLDLEKIGVETDKGGRILVNERFSTNVSGVYAIGDVIPGPM 360

  Fly   357 LAHKAEDEGLITIEGINGGHVHIDYNCVPSVVYTHPEVAWVGKSEEQLKQEGVAYKVGKFPFLAN 421
            ||||||::|:..:|.|.|.|.|:||:.||.||||:||||.|||:|||||:|||:|.||||||:||
plant   361 LAHKAEEDGVACVEFIAGKHGHVDYDKVPGVVYTYPEVASVGKTEEQLKKEGVSYNVGKFPFMAN 425

  Fly   422 SRAKTNNDTDGFVKVLADQATDKILGTHIIGPGAGELINEAVLAMEYGAAAEDVARVCHAHPTCS 486
            ||||..:..:|.||:|||:.||||||.||:.|.|||||:|||||:.|.|::||:|||||||||.|
plant   426 SRAKAIDTAEGMVKILADKETDKILGVHIMSPNAGELIHEAVLAINYDASSEDIARVCHAHPTMS 490

  Fly   487 EALREANVAAAFGKPIN 503
            ||::|| ..|.:.|||:
plant   491 EAIKEA-AMATYDKPIH 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7430NP_001262000.1 PRK06327 35..504 CDD:235779 271/470 (58%)
NADB_Rossmann 35..>74 CDD:304358 23/38 (61%)
Pyr_redox 211..290 CDD:278498 42/78 (54%)
Pyr_redox_dim 385..491 CDD:280934 74/105 (70%)
mtLPD2NP_566570.3 Pyr_redox_2 41..507 CDD:423044 271/470 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 361 1.000 Domainoid score I193
eggNOG 1 0.900 - - E1_COG1249
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H84
Inparanoid 1 1.050 545 1.000 Inparanoid score I261
OMA 1 1.010 - - QHG60979
OrthoDB 1 1.010 - - D581771at2759
OrthoFinder 1 1.000 - - FOG0003111
OrthoInspector 1 1.000 - - otm3505
orthoMCL 1 0.900 - - OOG6_100523
Panther 1 1.100 - - O PTHR22912
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2083
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.930

Return to query results.
Submit another query.