DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7430 and dld-1

DIOPT Version :9

Sequence 1:NP_001262000.1 Gene:CG7430 / 39988 FlyBaseID:FBgn0036762 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001255810.1 Gene:dld-1 / 178387 WormBaseID:WBGene00010794 Length:495 Species:Caenorhabditis elegans


Alignment Length:475 Identity:349/475 - (73%)
Similarity:395/475 - (83%) Gaps:2/475 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ARCYSSTHEADIVVIGSGPGGYVAAIKAAQMGMKTVSVEKEATLGGTCLNVGCIPSKALLNNSHY 93
            ||.||:|.:||:||||.|||||||||||||:|||||.|||.||||||||||||||||||||||||
 Worm    21 ARNYSNTQDADLVVIGGGPGGYVAAIKAAQLGMKTVCVEKNATLGGTCLNVGCIPSKALLNNSHY 85

  Fly    94 YHMAHSGDLEKRGISCGSVSLDLEKLMGQKSNAVKALTGGIAMLFKKNKVTQLTGFGTIVNPNEV 158
            .|||.. |...|||.| :.||:|.|:|..|||:||.|||||..|||.|||..:.||.|||.||.|
 Worm    86 LHMAQH-DFAARGIDC-TASLNLPKMMEAKSNSVKQLTGGIKQLFKANKVGHVEGFATIVGPNTV 148

  Fly   159 EVKKSDGSTETVKTKNILIATGSEVTPFPGIEIDEEVIVSSTGALKLAKVPKHLVVIGAGVIGLE 223
            :.||:|||.||:..:|||||:||||||||||.|||:.||||||||.|.:|||.:|||||||||||
 Worm   149 QAKKNDGSVETINARNILIASGSEVTPFPGITIDEKQIVSSTGALSLGQVPKKMVVIGAGVIGLE 213

  Fly   224 LGSVWSRLGAEVTAIEFMDTIGGVGIDNEVSKTFQKVLTKQGLKFKLGTKVTAASRSGDNVTVSV 288
            |||||.||||||||:||:..:||:|||.||||.||:.|||||.||.|.|||..||::|..:||.|
 Worm   214 LGSVWQRLGAEVTAVEFLGHVGGMGIDGEVSKNFQRSLTKQGFKFLLNTKVMGASQNGSTITVEV 278

  Fly   289 ENAKSGEKEEIQCDALLVSVGRRPYTEGLGLEAVGIVKDDRGRIPVNATFQTVVPNIYAIGDCIH 353
            |.||.|:|:.::||.||||||||||||||||..|.|..|:|||:|||..|||.||:|:||||.|.
 Worm   279 EGAKDGKKQTLECDTLLVSVGRRPYTEGLGLSNVQIDLDNRGRVPVNERFQTKVPSIFAIGDVIE 343

  Fly   354 GPMLAHKAEDEGLITIEGINGGHVHIDYNCVPSVVYTHPEVAWVGKSEEQLKQEGVAYKVGKFPF 418
            ||||||||||||::.:|||.||.|||||||||||||||||||||||:||||||||||||:|||||
 Worm   344 GPMLAHKAEDEGILCVEGIAGGPVHIDYNCVPSVVYTHPEVAWVGKAEEQLKQEGVAYKIGKFPF 408

  Fly   419 LANSRAKTNNDTDGFVKVLADQATDKILGTHIIGPGAGELINEAVLAMEYGAAAEDVARVCHAHP 483
            :||||||||||.:||||||||:.||::||.|||||.|||:|.||.|||||||:|||||||||.||
 Worm   409 VANSRAKTNNDQEGFVKVLADKQTDRMLGVHIIGPNAGEMIAEATLAMEYGASAEDVARVCHPHP 473

  Fly   484 TCSEALREANVAAAFGKPIN 503
            |.|||.||||:||..||.||
 Worm   474 TLSEAFREANLAAYCGKAIN 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7430NP_001262000.1 PRK06327 35..504 CDD:235779 345/469 (74%)
NADB_Rossmann 35..>74 CDD:304358 31/38 (82%)
Pyr_redox 211..290 CDD:278498 54/78 (69%)
Pyr_redox_dim 385..491 CDD:280934 87/105 (83%)
dld-1NP_001255810.1 PRK06327 27..486 CDD:235779 339/460 (74%)
NADB_Rossmann 29..>66 CDD:304358 30/36 (83%)
Pyr_redox 201..279 CDD:278498 53/77 (69%)
Pyr_redox_dim 375..481 CDD:280934 87/105 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165979
Domainoid 1 1.000 456 1.000 Domainoid score I248
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H84
Inparanoid 1 1.050 695 1.000 Inparanoid score I352
Isobase 1 0.950 - 0 Normalized mean entropy S261
OMA 1 1.010 - - QHG60979
OrthoDB 1 1.010 - - D283654at33208
OrthoFinder 1 1.000 - - FOG0003111
OrthoInspector 1 1.000 - - oto18556
orthoMCL 1 0.900 - - OOG6_100523
Panther 1 1.100 - - LDO PTHR22912
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2083
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.860

Return to query results.
Submit another query.