DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7430 and Gsr

DIOPT Version :9

Sequence 1:NP_001262000.1 Gene:CG7430 / 39988 FlyBaseID:FBgn0036762 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_446358.2 Gene:Gsr / 116686 RGDID:621747 Length:410 Species:Rattus norvegicus


Alignment Length:384 Identity:102/384 - (26%)
Similarity:169/384 - (44%) Gaps:63/384 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 KNKVTQLTGFGTIVNPNEVEVKKSDGSTETVKTK-------NILIATGSEVT-----PFPGIEID 192
            |:.:..:.|:.|.          :||...||:..       :||||||...|     ..||..:.
  Rat    52 KSHIEVIHGYATF----------ADGPQPTVEVNGKKFTAPHILIATGGVPTVPHENQIPGASLG 106

  Fly   193 EEVIVSSTGALKLAKVPKHLVVIGAGVIGLELGSVWSRLGAEVTAIEFMDTIGGVGIDNEVSKTF 257
                ::|.|..:|..:|...|::|||.|.:|:..:.|.||::.:.:...|.:.. ..|:.:|...
  Rat   107 ----ITSDGFFQLEDLPSRSVIVGAGYIAVEIAGILSALGSKTSLMIRHDKVLR-SFDSLISSNC 166

  Fly   258 QKVLTKQGLKFKLGTKVTAASRSGDNVTVSVENAKSGEKEEI----QCDALLVSVGRRPYTEGLG 318
            .:.|...|::....::|....::...:.:.|..|..|.|..:    ..|.||.::||.|.::||.
  Rat   167 TEELENAGVEVLKFSQVKEVKKTPSGLELHVVTALPGRKPTVTTIPDVDCLLWAIGRDPNSKGLN 231

  Fly   319 LEAVGIVKDDRGRIPVNATFQTVVPNIYAIGD-C----------IHGPMLAHKAEDEGLITIEGI 372
            |..:||..||:|.|.|:....|.|..:||:|| |          ..|..|||:       ..||.
  Rat   232 LNKLGIQTDDKGHILVDEFQNTNVKGVYAVGDVCGKALLTPVAIAAGRKLAHR-------LFEGK 289

  Fly   373 NGGHVHIDYNCVPSVVYTHPEVAWVGKSEEQLKQEGVAYKVGK-------FPFLANSRAKTNNDT 430
            ...  .:||:.:|:||::||.:..||.:|::     ..:|.||       ..|.....|.|...|
  Rat   290 EDS--RLDYDNIPTVVFSHPPIGTVGLTEDE-----AVHKYGKDNVKIYSTAFTPMYHAVTTRKT 347

  Fly   431 DGFVKVLADQATDKILGTHIIGPGAGELINEAVLAMEYGAAAEDVARVCHAHPTCSEAL 489
            ...:|::.....:|::|.|:.|.|..|::....:|::.||...|.......|||.||.|
  Rat   348 KCVMKMVCANKEEKVVGIHMQGIGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7430NP_001262000.1 PRK06327 35..504 CDD:235779 102/384 (27%)
NADB_Rossmann 35..>74 CDD:304358
Pyr_redox 211..290 CDD:278498 16/78 (21%)
Pyr_redox_dim 385..491 CDD:280934 32/112 (29%)
GsrNP_446358.2 gluta_reduc_1 1..410 CDD:273614 102/384 (27%)
Pyr_redox 121..197 CDD:278498 15/76 (20%)
Pyr_redox_dim 300..408 CDD:280934 32/112 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1249
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D581771at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.