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Protein Alignment MED19 and MED19A
DIOPT Version :9
Sequence 1: | NP_001287103.1 |
Gene: | MED19 / 39987 |
FlyBaseID: | FBgn0036761 |
Length: | 337 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_196784.1 |
Gene: | MED19A / 831097 |
AraportID: | AT5G12230 |
Length: | 221 |
Species: | Arabidopsis thaliana |
Alignment Length: | 189 |
Identity: | 52/189 - (27%) |
Similarity: | 77/189 - (40%) |
Gaps: | 49/189 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 63 ELTGDKDLMTEYGL--HHTLTKFKEKKFKESLAS--FLQNIPGINDLITHPVENSTLRSVIEK-- 121
||.|..||::::.| ||.. |.:|....||:. :|.|:.| |......|...|..:||.
plant 13 ELCGAADLISQFKLVQHHEF--FCKKSLPVSLSDSHYLHNVVG--DTEIRKGEGMQLDQLIESIS 73
Fly 122 ---------PPIGGKELL------PLTPVQLAGFRLHPGPLPEQYRTTYVTPARKHKNKHK-KQK 170
.|....||. .:|||:|.........:|.:.::......|||| ||| :.|
plant 74 QSRETNIRIQPFDIDELQESFQLNDMTPVELPPAEKGAPTIPSKSKSESKDRDRKHK-KHKDRDK 137
Fly 171 HKDGVTTGQESTLLDSAGLETYEKKHKKQK-RHEDDKERKKRKKEKKRKK-KNQSPEPG 227
.|| ::|||.| :|:|..:.|.:.|::.||| ||...:.|
plant 138 DKD--------------------REHKKHKHKHKDRSKDKDKDKDRDRKKDKNGHHDSG 176
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
MED19 | NP_001287103.1 |
Med19 |
50..202 |
CDD:287279 |
42/161 (26%) |
MED19A | NP_196784.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR22536 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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