DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED19 and CG14416

DIOPT Version :10

Sequence 1:NP_649016.1 Gene:MED19 / 39987 FlyBaseID:FBgn0036761 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_570031.1 Gene:CG14416 / 31273 FlyBaseID:FBgn0040352 Length:258 Species:Drosophila melanogaster


Alignment Length:223 Identity:50/223 - (22%)
Similarity:73/223 - (32%) Gaps:67/223 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PAKAELTGDKDLMTEYGLHHTLTKFKEKKFKESLASFLQNIPGINDLI----------------- 106
            ||..::...:|.|.::.|               :....|..|..|.::                 
  Fly    42 PAPQDVGSGRDFMKKFML---------------MRGLFQQPPSDNVIVITQPSTTTTTTTPTGSP 91

  Fly   107 ---------THPVENSTLRSVIE----KPPIGGKELLPLTPVQLAGFRLHPG-PLPEQYRTTYVT 157
                     |.|..|||.||:.|    :.|....|........|.|..|... .||:........
  Fly    92 TTTTSTTTTTTPTSNSTGRSLQESVHRQQPQDDDEAQETGVTTLTGRVLDDRLDLPDGEEEPQEL 156

  Fly   158 PARKHKNKHKKQKHKDGVTTGQESTLLDSAGLETYEKKHK---KQKRHEDDKERKKRKKEKKRKK 219
            ...||..|.||...|......::..|:.    :|:.:.||   |:|||:      |||..||:..
  Fly   157 VTHKHTQKPKKFNMKSVKLNNRKKNLVK----KTHRRVHKHPQKKKRHQ------KRKLNKKQSA 211

  Fly   220 KNQ--SPEPGVGLLP------GGASLGG 239
            .||  :.||.|..:.      |.:..||
  Fly   212 ANQQRNSEPAVNFIEPYHQDRGQSQAGG 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED19NP_649016.1 Med19 50..202 CDD:287279 35/176 (20%)
CG14416NP_570031.1 None

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