DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MED19 and mdt-19

DIOPT Version :10

Sequence 1:NP_649016.1 Gene:MED19 / 39987 FlyBaseID:FBgn0036761 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_497587.1 Gene:mdt-19 / 175378 WormBaseID:WBGene00007019 Length:199 Species:Caenorhabditis elegans


Alignment Length:193 Identity:64/193 - (33%)
Similarity:101/193 - (52%) Gaps:36/193 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PFYSMKE--PPAKAELTGDKDLMTEYGLHHTLTKFK-EKKFKESLASFLQNIPGINDLITHPVEN 112
            |||::|.  || .:|:.|:.||:..|.|......|. .::.||.::|||.:|.|...| ....|.
 Worm    21 PFYTLKALLPP-YSEIQGNHDLLMSYELGPVEGGFSGSRRVKEKISSFLPHIIGEFHL-DATKEA 83

  Fly   113 STLRSVIEKPPIGGKELLPLTPVQLAGFRLHPGPLPEQYRTTYVTPARKHKNKHKKQKHKDGVTT 177
            |:||::|||||| .||:..||...:.||:|..||:.|:||..:           :::|.:..:..
 Worm    84 SSLRALIEKPPI-HKEISNLTSSSMQGFKLSAGPVDERYRHLF-----------ERRKEEPNLAY 136

  Fly   178 GQESTLL------DSAGLET------YEKKHKKQKRHEDDKERKKRKKE----KKRKKKNQSP 224
            .::..|:      |:.|.:.      :.|||||:|:   ||:|||.|:|    :|||:....|
 Worm   137 SEKLNLIRVRQQYDAYGFDDDETEKGFPKKHKKKKK---DKKRKKEKEELGDAEKRKRAADEP 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED19NP_649016.1 Med19 50..202 CDD:287279 53/165 (32%)
mdt-19NP_497587.1 Med19 20..199 CDD:287279 64/193 (33%)

Return to query results.
Submit another query.