DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5567 and Lhpp

DIOPT Version :10

Sequence 1:NP_649015.2 Gene:CG5567 / 39986 FlyBaseID:FBgn0036760 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001009706.1 Gene:Lhpp / 361663 RGDID:1359187 Length:270 Species:Rattus norvegicus


Alignment Length:294 Identity:74/294 - (25%)
Similarity:122/294 - (41%) Gaps:43/294 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EWLAGFDSVITDCDGVLWIY----GQALEGSVDVMNQLKGMGKSIYFCTNNSTKTRSELLKKGVE 94
            |.|:|...|:.|..|||:..    |.|:.|||:.:.:||.....:.||||.|.|:|.||:.....
  Rat     6 ERLSGVRGVLLDISGVLYDSGTGGGAAIAGSVEAVARLKRSPLKVRFCTNESQKSRRELVGVLQR 70

  Fly    95 LGFHIKENGIISTAHATAAYLKRRNFSKRVFVIGSEGITKELDAVGIQHTEVGPEPMKGSLAEFM 159
            |||.|.|..:.:.|.||...||.|.....:.:  .||:..|.|.:.:.:...             
  Rat    71 LGFDISEGEVTAPAPATCQILKERGLRPHLLI--HEGVRSEFDDIDMSNPNC------------- 120

  Fly   160 AQHLKLDTDIGAVVVGFDEHFSFPKMMKAASYLNDPE-CLFVATNTDERFPMPNMIVPGSGSFVR 223
                       .|:....|.||:..|.:|...|.:.| .:.::......:...:.::...|.:::
  Rat   121 -----------VVIADAGEGFSYQNMNRAFQVLMELENPVLISLGKGRYYKETSGLMLDVGGYMK 174

  Fly   224 AIQTCAERDPVVIGKPNPAICESLVTEKKIDPSRTLMIGDRANTDILLGFNCGFQTLLVGSGIHQ 288
            |::.....:..|:|||:|....|.:....::..:.:||||....|:.....||.:.|.|.:|..:
  Rat   175 ALEYACGIEAEVVGKPSPEFFRSALQAIGVEAHQAIMIGDDIVGDVGGAQQCGMRALQVRTGKFR 239

  Fly   289 LKDVERWKLSQDPEEKKLIPDVYLPKLG---DLL 319
            ..|      ...||.:   .|.|:..|.   |||
  Rat   240 PGD------EHHPEVR---ADGYVDNLAEAVDLL 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5567NP_649015.2 HAD_PNPase_UmpH-like 34..318 CDD:319834 71/291 (24%)
LhppNP_001009706.1 HAD-SF-IIA-hyp3 11..267 CDD:162372 71/289 (25%)

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