DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5567 and pgph-3

DIOPT Version :10

Sequence 1:NP_649015.2 Gene:CG5567 / 39986 FlyBaseID:FBgn0036760 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_504511.1 Gene:pgph-3 / 178964 WormBaseID:WBGene00016892 Length:349 Species:Caenorhabditis elegans


Alignment Length:313 Identity:124/313 - (39%)
Similarity:188/313 - (60%) Gaps:19/313 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SCTNLLELSSAKVTEWLAGFDSVITDCDGVLWIYGQALEGSVDVMNQLKGMGKSIYFCTNNSTKT 84
            :|.:.|.|.....::.:...|:.|.|.|||||:....:.||..:::.|....|.|...|||:||:
 Worm    37 NCRSTLPLDPKSFSKVMKTIDTFIFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNATKS 101

  Fly    85 RSELLKKGVELGFH---IKENGIISTAHATAAYLKRRNF-SKRVFVIGSEGITKELDAVGIQHTE 145
            |:...||..:||::   :.:|.:::.|...|..|.|... .|||::||.:|:..|:|.:||::..
 Worm   102 RAVYAKKLAKLGYNSSKMNKNNLVNPAAVVADTLHRAGLDGKRVYLIGEQGLRDEMDELGIEYFG 166

  Fly   146 VGPEPMK----GSLAEFMAQHLKLDTDIGAVVVGFDEHFSFPKMMKAASYLNDPECLFVATNTDE 206
            .|||..:    ||.| || ..:||:.::||||||:::||.:.|||||::||.:...||||||.||
 Worm   167 HGPEKKQDEADGSGA-FM-YDIKLEENVGAVVVGYEKHFDYVKMMKASNYLREEGVLFVATNEDE 229

  Fly   207 RFPMPN--MIVPGSGSFVRAIQTCAERDPVVIGKP-NPAICESLVTEK-KIDPSRTLMIGDRANT 267
            ..|.||  :::|.:|..|.||:..:.|||:.:||| .||.  :.:..| .|:||||:|||||.||
 Worm   230 TCPGPNPEVVIPDAGPIVAAIKCASGRDPLTVGKPCTPAF--NYIKRKWNINPSRTMMIGDRTNT 292

  Fly   268 DILLGFNCGFQTLLVGSGIHQLKDVERWKLSQDPEEKKLIPDVYLPKLGDLLP 320
            |:..|.:.|.:||||.||.||::|:..   :|..|...::||...|.||.|:|
 Worm   293 DVKFGRDHGMKTLLVLSGCHQIEDIIE---NQMNERDDMVPDYVAPYLGALVP 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5567NP_649015.2 HAD_PNPase_UmpH-like 34..318 CDD:319834 119/295 (40%)
pgph-3NP_504511.1 PGP_euk 55..340 CDD:273635 119/291 (41%)

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