DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5567 and pgph-1

DIOPT Version :10

Sequence 1:NP_649015.2 Gene:CG5567 / 39986 FlyBaseID:FBgn0036760 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_504509.1 Gene:pgph-1 / 178963 WormBaseID:WBGene00019604 Length:322 Species:Caenorhabditis elegans


Alignment Length:303 Identity:124/303 - (40%)
Similarity:185/303 - (61%) Gaps:22/303 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 AKVTEWLAGFDSVITDCDGVLWIYGQALEGSVDVMNQLKGMGKSIYFCTNNSTKTRSELLKKGVE 94
            |||.:.:   |:.|.|.|||||:....:.||..:::.|....|.|...|||:||:|:...||..:
 Worm    23 AKVMKTI---DTFIFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNATKSRAVYAKKLAK 84

  Fly    95 LGFH---IKENGIISTAHATAAYLKRRNF-SKRVFVIGSEGITKELDAVGIQHTEVGPEPMK--- 152
            ||::   :.:|.:::.|...|..|.|... .|||::||.:|:..|:|.:||::...|||..:   
 Worm    85 LGYNSSKMNKNNLVNPAAVVADTLHRAGLDGKRVYLIGEQGLRDEMDELGIEYFGHGPEKKQDEA 149

  Fly   153 -GSLAEFMAQHLKLDTDIGAVVVGFDEHFSFPKMMKAASYLNDPECLFVATNTDERFPMPN--MI 214
             ||.| || ..:||:.::||||||:::||.:.|||||::||.:...||||||.||..|.||  ::
 Worm   150 DGSGA-FM-YDIKLEENVGAVVVGYEKHFDYVKMMKASNYLREEGVLFVATNEDETCPGPNPEVV 212

  Fly   215 VPGSGSFVRAIQTCAERDPVVIGKP-NPAICESLVTEK-KIDPSRTLMIGDRANTDILLGFNCGF 277
            :|.:|..|.||:..:.|||:.:||| .||.  :.:..| .|:||||:|||||.|||:..|.:.|.
 Worm   213 IPDAGPIVAAIKCASGRDPLTVGKPCTPAF--NYIKRKWNINPSRTMMIGDRTNTDVKFGRDHGM 275

  Fly   278 QTLLVGSGIHQLKDVERWKLSQDPEEKKLIPDVYLPKLGDLLP 320
            :||||.||.||::|:..   :|..|...::||...|.||.|:|
 Worm   276 KTLLVLSGCHQIEDIIE---NQMNERDDMVPDYVAPCLGALVP 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5567NP_649015.2 HAD_PNPase_UmpH-like 34..318 CDD:319834 119/295 (40%)
pgph-1NP_504509.1 PGP_euk 28..313 CDD:273635 119/294 (40%)

Return to query results.
Submit another query.