DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5567 and Nipsnap2

DIOPT Version :9

Sequence 1:NP_649015.2 Gene:CG5567 / 39986 FlyBaseID:FBgn0036760 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_032121.3 Gene:Nipsnap2 / 14467 MGIID:1278343 Length:281 Species:Mus musculus


Alignment Length:90 Identity:20/90 - (22%)
Similarity:32/90 - (35%) Gaps:28/90 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 INMYKQSCTNLLELSSAKVTE--------------WLAGFDSVITDCDGVLWIYGQALEGSVDVM 64
            ::.|.:.|..:|    .|:.|              |....|..:.     ||.|........:||
Mouse    81 LDAYNKICQEVL----PKIHEGKQYPCTLVGTWNTWYGEQDQAVH-----LWRYEGGYPALTEVM 136

  Fly    65 NQLKGMGKSIYFCTNNSTKTRSELL 89
            |:||...:.:     |..|.||::|
Mouse   137 NKLKENQEFV-----NFRKARSDML 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5567NP_649015.2 PGP_euk 40..318 CDD:273635 14/50 (28%)
Hydrolase_6 42..142 CDD:290083 13/48 (27%)
Hydrolase_like 235..318 CDD:289983
Nipsnap2NP_032121.3 NIPSNAP 182..279 CDD:285252
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R944
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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