DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5577 and Lhpp

DIOPT Version :9

Sequence 1:NP_001303369.1 Gene:CG5577 / 39985 FlyBaseID:FBgn0036759 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_083885.1 Gene:Lhpp / 76429 MGIID:1923679 Length:270 Species:Mus musculus


Alignment Length:315 Identity:79/315 - (25%)
Similarity:129/315 - (40%) Gaps:64/315 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RGGAIDLTGLSEEQVSEWLQSFDTVLCDGDGTIWQDDTAIAGAPDVVNALQDRFDKKVYLITNNG 67
            ||..:|::|               ||||...:   ..|||||:.:.|..|: :...||...||..
Mouse    12 RGVLLDISG---------------VLCDSSAS---GATAIAGSVEAVARLK-QSPLKVRFCTNES 57

  Fly    68 LKTRQELFERSQRLGFHLPSDRHIISPTAAIADYLVGSPKFDRTRHKVYVVGNAAIARELRQRGI 132
            .|:.:||....|:|||.: |:..:.:|..|....                         |::|| 
Mouse    58 QKSLRELVGVLQQLGFDI-SEEEVTAPAPATCQI-------------------------LKERG- 95

  Fly   133 DSYGAGGTDELPPGDKWPDFVTREFGNPEAAKDVGAVVVGWDEYFSYCKMARACHILCSNPDAAF 197
                      |.|.....:.|..||.:.:.:.....|:....|.|||..|.||..:|....:...
Mouse    96 ----------LRPHLLIHEGVRSEFDDIDMSNPNCVVIADAGEAFSYQNMNRAFQVLMELENPVL 150

  Fly   198 LVTNRDAVHKYPSFCIPGTGAFVAGIEACSEREALEMGKPNPLVLEPFIKAEGLRTERTLMIGDC 262
            :...:...:|..|..:...|.::..:|.....:|..:|||:|...:..::|.|:...:.:||||.
Mouse   151 ISLGKGRYYKETSGLMLDVGGYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAIMIGDD 215

  Fly   263 LKIDVGFASNCGMLSLLVGTGRYNNLSDVRLEKDRLP--QPDFYLPRLGDLLNIL 315
            :..|||.|..|||.:|.|.||::      |...:..|  |.|.|:..|.:.:::|
Mouse   216 IVGDVGGAQQCGMRALQVRTGKF------RPGDEHHPEVQADGYVDNLAEAVDLL 264

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG5577NP_001303369.1 PGP_euk 25..311 CDD:273635 74/287 (26%)
Hydrolase_6 27..132 CDD:290083 27/104 (26%)
Hydrolase_like 234..311 CDD:289983 27/78 (35%)
LhppNP_083885.1 HAD-SF-IIA-hyp3 11..267 CDD:162372 79/315 (25%)
Hydrolase_6 14..112 CDD:290083 35/153 (23%)
Substrate binding. /evidence=ECO:0000250 17..19 1/1 (100%)