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Protein Alignment CG5577 and hdhd2

DIOPT Version :9

Sequence 1:	NP_001303369.1	Gene:	CG5577 / 39985	FlyBaseID:	FBgn0036759	Length:	315	Species:	Drosophila melanogaster
Sequence 2:	NP_001013491.1	Gene:	hdhd2 / 541346	ZFINID:	ZDB-GENE-050320-37	Length:	262	Species:	Danio rerio

Alignment Length:	307	Identity:	80/307 - (26%)
Similarity:	128/307 - (41%)	Gaps:	70/307 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly    22 QSFDTVLCDGDGTIWQDDTAIAGAPDVVNALQDRFDKKVYLITNNGLKTRQELFERSQRLGFHLP 86
            ::...||.|..||:..:|||:.||.:.:..|: :....|..:||...:.::.||||.:.|.|.|.
Zfish     5 RTLKAVLIDLSGTLHIEDTAVPGAQEALARLR-QAPVAVKFVTNTTKECKRTLFERLRGLNFDLQ 68

  Fly    87 SDRHIISPTAA--IADYLVGSPKFDRTRHKVYVVGNAAIARELRQRGIDSYGAGGTDELPPGDKW 149
            ......|.|||  :.:.....|        :.:|.::|:
Zfish    69 QQEIFTSLTAARNLVEQKAVRP--------LLMVEDSAL-------------------------- 99

  Fly   150 PDFVTREFGNPEAAKDVGAVVVGW-DEYFSYCKMARACHILCSNPDAAFLVTNRDAVHKYPSF-- 211
            .||...|..:|      .|||:|. .::|:|..:.:|..::.   |.|.|:    |:||...:
Zfish   100 EDFTGLETSDP------NAVVIGLAPDHFNYQTLNKAFQLIL---DGAPLI----AIHKARYYKK 151

  Fly   212 ---CIPGTGAFVAGIEACSEREALEMGKPNPLVLEPFIKAEGLR-----TERTLMIGDCLKIDVG 268
               ...|.|.||.|:|..::.:|..:|||     |.....|.||     .|..:||||..:.|||
Zfish   152 KDGLALGPGPFVTGLEYATDTKATVVGKP-----EKGFFLEALRDLNCSPEEAVMIGDDARDDVG 211

  Fly   269 FASNCGMLSLLVGTGRYNNLSDVRLEKDRLPQPDFYLPRLGDLLNIL 315
            .|.|.|||.:||.||:|....:.::.    |.|........:.:|.:
Zfish   212 GAQNAGMLGILVKTGKYRPADEGKIN----PPPHLTCASFPEAVNYI 254

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.