DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5577 and Lhpp

DIOPT Version :10

Sequence 1:NP_649014.1 Gene:CG5577 / 39985 FlyBaseID:FBgn0036759 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_001009706.1 Gene:Lhpp / 361663 RGDID:1359187 Length:270 Species:Rattus norvegicus


Alignment Length:304 Identity:80/304 - (26%)
Similarity:126/304 - (41%) Gaps:50/304 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SEWLQSFDTVLCDGDGTIWQDDT----AIAGAPDVVNALQDRFDKKVYLITNNGLKTRQELFERS 78
            :|.|.....||.|..|.::...|    ||||:.:.|..|: |...||...||...|:|:||....
  Rat     5 AERLSGVRGVLLDISGVLYDSGTGGGAAIAGSVEAVARLK-RSPLKVRFCTNESQKSRRELVGVL 68

  Fly    79 QRLGFHLPSDRHIISPTAAIADYLVGSPKFDRTRHKVYVVGNAAIARELRQRGIDSYGAGGTDEL 143
            |||||.: |:..:.:|..|....                         |::||           |
  Rat    69 QRLGFDI-SEGEVTAPAPATCQI-------------------------LKERG-----------L 96

  Fly   144 PPGDKWPDFVTREFGNPEAAKDVGAVVVGWDEYFSYCKMARACHILCSNPDAAFLVTNRDAVHKY 208
            .|.....:.|..||.:.:.:.....|:....|.|||..|.||..:|....:...:...:...:|.
  Rat    97 RPHLLIHEGVRSEFDDIDMSNPNCVVIADAGEGFSYQNMNRAFQVLMELENPVLISLGKGRYYKE 161

  Fly   209 PSFCIPGTGAFVAGIEACSEREALEMGKPNPLVLEPFIKAEGLRTERTLMIGDCLKIDVGFASNC 273
            .|..:...|.::..:|.....||..:|||:|......::|.|:...:.:||||.:..|||.|..|
  Rat   162 TSGLMLDVGGYMKALEYACGIEAEVVGKPSPEFFRSALQAIGVEAHQAIMIGDDIVGDVGGAQQC 226

  Fly   274 GMLSLLVGTGRYNNLSDVRLEKDRLPQ--PDFYLPRLGDLLNIL 315
            ||.:|.|.||::      |...:..|:  .|.|:..|.:.:::|
  Rat   227 GMRALQVRTGKF------RPGDEHHPEVRADGYVDNLAEAVDLL 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5577NP_649014.1 HAD_PNPase_UmpH-like 19..311 CDD:319834 79/297 (27%)
LhppNP_001009706.1 HAD-SF-IIA-hyp3 11..267 CDD:162372 78/298 (26%)

Return to query results.
Submit another query.