DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grd and LOC5667031

DIOPT Version :10

Sequence 1:NP_524131.1 Gene:Grd / 39984 FlyBaseID:FBgn0001134 Length:686 Species:Drosophila melanogaster
Sequence 2:XP_061505913.1 Gene:LOC5667031 / 5667031 VectorBaseID:AGAMI1_008409 Length:471 Species:Anopheles gambiae


Alignment Length:570 Identity:111/570 - (19%)
Similarity:205/570 - (35%) Gaps:148/570 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 YDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDKRL--AFEG-AQDTLALS 181
            ||.:::|  .|....:.|.:.:..:..:.|.....|.|.:.:.:|.|.|:  .|.. ..:.:.|:
Mosquito    34 YDKNVKP--AGTLTDVSVSLYINRISGVDENKEEISFDVFLQITWEDLRIQPVFNNKVGEYVELT 96

  Fly   182 VSMLARIWKPDTYFYNGKQSYLHTITTPNKFVRIYQNGRVLYSSRLTIKAGCPMNLADFPMDIQK 246
            .:....||.||.|....::..:.|:......:|:|:|..:..|...||...|.|:...:|:|:|:
Mosquito    97 KADRDMIWVPDLYIRQLREMKMLTLFEEISSLRLYENSTISLSIGATIIIKCDMDFVLYPLDVQR 161

  Fly   247 CPLKFGSFGYTTSDVIYRWNKERPPVAIAEDMKLSQFDLVDCPAGNLTDIVYKAAAPRPQRRPFN 311
            ||:.|.|:.|...|:.:||..|. .::...|.....|.|                          
Mosquito   162 CPVDFSSYKYPVKDLRFRWRSEN-ALSFPNDFGDGFFRL-------------------------- 199

  Fly   312 NKDPPRPTSKVMTTFAGPAAKNQHVRGTGLKLDKGAFGTGRDATGGSGSTTGLSGTITLETNHPS 376
                    .|.:.:|                           .|.........|     :.||  
Mosquito   200 --------PKYVVSF---------------------------YTEQESQIVNYS-----DDNH-- 222

  Fly   377 EYSMLMVNFHLQRHMGNFLIQVYGPCCLLVVLSWVSFWLNREATADRVSLGITTVLTMTFLGLEA 441
              |...:...|.|.:.::|::.|.|..|.|.:||.||.:..|....|:.|.:||:|::..:....
Mosquito   223 --SSARLEITLSREVKSYLLENYLPSTLFVSISWGSFVVVPEIVPGRMVLLVTTLLSLITMFDTV 285

  Fly   442 RTDLPKVSYPTALDFFVFLSFGFIFATILQFAVVHYYTKYGSGECYFIIEELDSESGESETEPLT 506
            |.:.|.......|:.::.....|:|..::::.:|.:..:|                         
Mosquito   286 RNNSPDALELKCLEVWLISCTLFVFFALMEYFIVLFGIRY------------------------- 325

  Fly   507 SDFRGSTESKIYEVIPLSMCAISMPPPPT--------RLGMLTSRNRRPRNRRHGL--WSMKLLG 561
                    .|.:.|.. :..|.|:||..|        :..|.||.|.....|.:||  .::|:.|
Mosquito   326 --------DKHWRVAK-AQHASSIPPSITLQSAVTMAQSTMDTSINSASFQRENGLEHATLKVSG 381

  Fly   562 LFDWRRRRKPPRADSDEDEDDEQTQLRANEAPTTSAAAAAAQAAAQAARISPPTGGRRRMSYYRR 626
                                ..:.|...:.:.||||:.:..|...|:|:.......|:|  :...
Mosquito   382 --------------------TNKIQPHDHNSKTTSASLSNIQDTVQSAQKVSSVMTRKR--FRNV 424

  Fly   627 EEMEARRKGKRTPQYNSVSKIDRASRIVFPLLFILINVFYWYGYLSRSSR 676
            .::.....|.:.      .::|:.|.|:||:.|::..:.||..||:.|.:
Mosquito   425 ADVALLYAGSQR------GRLDQLSLIIFPVSFLIFTISYWTMYLTESKK 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GrdNP_524131.1 LIC 111..670 CDD:455710 108/562 (19%)
LGIC_ECD_GABAR_GRD-like 132..300 CDD:349808 38/170 (22%)
Cys-loop 233..247 CDD:349808 5/13 (38%)
LOC5667031XP_061505913.1 None

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