Sequence 1: | NP_524131.1 | Gene: | Grd / 39984 | FlyBaseID: | FBgn0001134 | Length: | 686 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001356885.1 | Gene: | nAChRalpha5 / 34826 | FlyBaseID: | FBgn0028875 | Length: | 837 | Species: | Drosophila melanogaster |
Alignment Length: | 501 | Identity: | 100/501 - (19%) |
---|---|---|---|
Similarity: | 173/501 - (34%) | Gaps: | 158/501 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 LIAARSLSSHQGQRSNLRIFKLLISCCLLMLCIYPNAWPWSIGPGSGPFSVSADSIKGRGDTHRL 84
Fly 85 GEMGTSLSSSLPSSWLTQSNNHA--------NIS-----------ELLDNLLRGYDNSIRPDFG- 129
Fly 130 GPPATIEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDKRLA-----FEGAQDTLALSVSMLARIW 189
Fly 190 KPDTYFYNGKQSYLHTITTPNKFVRIYQNGRVLYSSRLTIKAGCPMNLADFPMDIQKCPLKFGSF 254
Fly 255 GYTTSDVIYRWNKERPPVAIAEDMKLSQFDLVDCPAGNLTDIVYKAAAPRPQRRPFNNKDPPRPT 319
Fly 320 SKVMTTFAGPAAKNQHVRGTGLKLDKGAFGTGRDATGGSGSTTGLSGTITL-----ETNH----- 374
Fly 375 -PSEYSMLMVNFHLQRHMGNFLIQVYGPCCLLVVLSWVSFWLNREATADRVSLGITTVLTMT-FL 437
Fly 438 GLEARTDLPKVS-----YPTALDFFVFLSFGFIFATILQFAVVHYY 478 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grd | NP_524131.1 | Neur_chan_LBD | 110..326 | CDD:280998 | 43/232 (19%) |
LIC | 111..670 | CDD:273305 | 80/391 (20%) | ||
Neur_chan_memb | 398..667 | CDD:280999 | 23/87 (26%) | ||
nAChRalpha5 | NP_001356885.1 | LIC | 313..802 | CDD:273305 | 80/393 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447313 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |