Sequence 1: | NP_524131.1 | Gene: | Grd / 39984 | FlyBaseID: | FBgn0001134 | Length: | 686 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001162795.1 | Gene: | nAChRalpha7 / 32928 | FlyBaseID: | FBgn0086778 | Length: | 564 | Species: | Drosophila melanogaster |
Alignment Length: | 448 | Identity: | 91/448 - (20%) |
---|---|---|---|
Similarity: | 156/448 - (34%) | Gaps: | 137/448 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 112 LLDNLLRGYDNSIRPDFG-GPPATIEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDKRL-----A 170
Fly 171 FEGAQDTLALSVSMLARIWKPDTYFYNGKQSYLHTITTPNKFVRIYQNGRVLYSSRLTIKAGCPM 235
Fly 236 NLADFPMDIQKCPLKFGSFGYTTSDVIYRWNKERPPVAIAEDMKLSQFDLVDCPAGNLTDIVYKA 300
Fly 301 AAPRPQRRPFNNKDPPRPTSKVMTTFAGPAAKNQHVRGTGLKLDKGAFGTGRDATGGSGSTTGLS 365
Fly 366 GTITLETNHPSEYSMLMVNFHLQRHMGNFLIQVYGPCCLLVVLSWVSFWLNREATADRVSLGITT 430
Fly 431 VLTMT-FLGLEARTDLPKVS-----YPTALDFFVFLSFGFIFATILQFAVVHYYTKYGSGECYFI 489
Fly 490 IEELDSESGESETEPLTSDFRGSTESKIYEVIPLSM--CAISM----------PPPPT 535 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grd | NP_524131.1 | Neur_chan_LBD | 110..326 | CDD:280998 | 52/219 (24%) |
LIC | 111..670 | CDD:273305 | 91/448 (20%) | ||
Neur_chan_memb | 398..667 | CDD:280999 | 35/156 (22%) | ||
nAChRalpha7 | NP_001162795.1 | LIC | 59..548 | CDD:273305 | 91/448 (20%) |
Neur_chan_LBD | 61..268 | CDD:280998 | 55/280 (20%) | ||
Neur_chan_memb | 275..552 | CDD:280999 | 35/160 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447315 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |