Sequence 1: | NP_524131.1 | Gene: | Grd / 39984 | FlyBaseID: | FBgn0001134 | Length: | 686 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_058991.2 | Gene: | Gabra5 / 29707 | RGDID: | 61859 | Length: | 464 | Species: | Rattus norvegicus |
Alignment Length: | 596 | Identity: | 191/596 - (32%) |
---|---|---|---|
Similarity: | 274/596 - (45%) | Gaps: | 172/596 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 93 SSLP-SSWLTQSNNHANI-SELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYS 155
Fly 156 MDCYFRQSWVDKRLAFEGAQDTLALSVSMLARIWKPDTYFYNGKQSYLHTITTPNKFVRIYQNGR 220
Fly 221 VLYSSRLTIKAGCPMNLADFPMDIQKCPLKFGSFGYTTSDVIYRW-NKERPPVAIAED-MKLSQF 283
Fly 284 DLVDCPAGNLTDIVYKAAAPRPQRRPFNNKDPPRPTSKVMTTFAGPAAKNQHVRGTGLKLDKGAF 348
Fly 349 GTGRDATGGSGSTTGLSGTITLETNHPSEYSMLMVNFHLQRHMGNFLIQVYGPCCLLVVLSWVSF 413
Fly 414 WLNREATADRVSLGITTVLTMTFLGLEARTDLPKVSYPTALDFFVFLSFGFIFATILQFAVVHYY 478
Fly 479 TKYG---SGECYFIIEELDSESGESETEPLTSDFRGSTESKIYEVIPLSMCAISMPPPPTRLGML 540
Fly 541 TSRNRRPRNRRHGLWSMKLLGLFDWRRRRKPPRADSDEDEDDEQTQLRANEAPTTSAAAAAAQAA 605
Fly 606 AQAARISPPTGGRRRMSYYRREEMEARRKGKRTPQYNSVSKIDRASRIVFPLLFILINVFYWYGY 670
Fly 671 LSRSSRILANT 681 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grd | NP_524131.1 | Neur_chan_LBD | 110..326 | CDD:280998 | 87/217 (40%) |
LIC | 111..670 | CDD:273305 | 180/563 (32%) | ||
Neur_chan_memb | 398..667 | CDD:280999 | 76/271 (28%) | ||
Gabra5 | NP_058991.2 | LIC | 15..450 | CDD:273305 | 186/583 (32%) |
LGIC_ECD_GABAAR_A5 | 58..256 | CDD:349839 | 93/273 (34%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 382..414 | 9/92 (10%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 199 | 1.000 | Domainoid score | I2964 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 373 | 1.000 | Inparanoid score | I2041 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1057372at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X127 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.970 |