Protein Alignment Grd and exp-1

DIOPT Version :9

• Sequence 1: NP_524131.1
• Gene: Grd / 39984
• FlyBaseID: FBgn0001134
• Length: 686
• Species: Drosophila melanogaster
• Sequence 2: NP_495229.3
• Gene: exp-1 / 186801
• WormBaseID: WBGene00001373
• Length: 539
• Species: Caenorhabditis elegans
• Alignment Length: 464
• Identity: 111/464 - (23%)
• Similarity: 188/464 - (40%)
• Gaps: 122/464 - (26%)

  Fly    61 IGPGSGPFSVSADSIKGRGDTHRLGEMGTSLSSSLPSSWLTQS-------NNHANISELLDNLLR 118
            :|.|:.|....:    ..|......||..|.:.:.|:   |:|       :::....:.|..|.|
 Worm    51 LGRGAAPSKYRS----SHGQAQHRPEMTESENFAQPN---TESVFSSGGVDSYGETRDFLQFLRR 108

  Fly   119 -GYDNSIRPDFGGPPAT-IEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDKRLAFEGA----QDT 177
             .||:...|:.....|| :||.::|.::..:|||.|.|:::.::|:||.|.||.::..    :..
 Worm   109 IQYDHRQVPENEKGEATYVEVSVVVSNIRAVSEVTMDYALELFYRESWRDPRLQYDRKLFKNKTE 173

  Fly   178 LALSVSMLARIWKPDTYFYNG-------KQSYLHTITTPNKFVRIYQNGRVLYSSRLTIKAGCPM 235
            |||..|....:|.|||:..|.       :.|..|     ...:|:.:.|::|||.|:::...|.|
 Worm   174 LALHESYTNFLWFPDTFVPNAIASKNPQRNSISH-----RSLLRLDETGKLLYSRRISLVCECTM 233

  Fly   236 NLADFPMDIQKCPLKFGSFGYTTSDVIYRWNKERPPVAIAEDMKLSQFDLVDCPAGNLTDIVYKA 300
            :|..||.|.|.|.|...|:|||...|:|:|:|........:.::|..|.:.:
 Worm   234 DLTLFPFDKQLCKLGIESYGYTADHVVYKWSKGARTALELKKIRLPDFTIQE------------- 285

  Fly   301 AAPRPQRRPFNNKDPPRPTSKVMTTFAGPAAKNQHVRGTGLKLDKGAFGTGRDATGGSGSTTGLS 365
                                                          |:.|.:
 Worm   286 ----------------------------------------------AYVTSQ------------- 291

  Fly   366 GTITLETNHPSEYSMLMVNFHLQRHMGNFLIQVYGPCCLLVVLSWVSFWLNREAT-ADRVSLGIT 429
                :|:.....||.|.|.|...|..|...:|:..|...:|:.||||.|:..|.. .|.:|:
 Worm   292 ----MESYATGNYSRLYVCFVFSRSSGFCFLQLIIPSTAVVITSWVSLWMETETEFQDMISI--- 349

  Fly   430 TVLTMTFLGLEARTDLPKVSYPTALDFFVFLSFGFIFATILQFAVVHYYTKYGSGECYFIIEELD 494
             :|.:|||.......:|:|||..|:|.::.:.|..:|.::::.|:|.|..:.       |:  |.
 Worm   350 -ILAITFLIFSYNEMMPRVSYIKAMDIYLGVCFMIVFLSLIKLALVKYMRQK-------IM--LT 404

  Fly   495 SESGESETE 503
            |:||.|..|
 Worm   405 SDSGNSLRE 413

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Grd	NP_524131.1	Neur_chan_LBD	110..326	CDD:280998	58/228 (25%)
		LIC	111..670	CDD:273305	101/407 (25%)
		Neur_chan_memb	398..667	CDD:280999	32/107 (30%)
exp-1	NP_495229.3	LIC	103..515	CDD:273305	101/405 (25%)
		Neur_chan_LBD	111..311	CDD:280998	63/280 (23%)
		Neur_chan_memb	320..>397	CDD:280999	24/80 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810