Protein Alignment Grd and lgc-44

DIOPT Version :9

• Sequence 1: NP_524131.1
• Gene: Grd / 39984
• FlyBaseID: FBgn0001134
• Length: 686
• Species: Drosophila melanogaster
• Sequence 2: NP_505954.2
• Gene: lgc-44 / 179600
• WormBaseID: WBGene00009790
• Length: 618
• Species: Caenorhabditis elegans
• Alignment Length: 440
• Identity: 101/440 - (22%)
• Similarity: 161/440 - (36%)
• Gaps: 131/440 - (29%)

  Fly    66 GPFSVSADSIKGRGDTHRLGEM---------------GTSLSSSLPSSWLTQSNNHANISELLDN 115
            |.||.:..::....|  :|.||               |......||||.:..
 Worm   203 GDFSFNVSNLNIELD--KLHEMVHDFKPLDQIMNQNLGLDYQRPLPSSTILP------------- 252

  Fly   116 LLRGYDNSIRPDFGGPPA-------TIEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDKRLAFEG 173
            .||..:...|.    ||:       |::|.|.|:||.......|.|.:|.:.|.||:|.||..:.
 Worm   253 FLRKMEYDARQ----PPSLHVDDTVTVKVGIAVQSMSNFELSTMDYDLDAWVRMSWIDPRLRHDL 313

  Fly   174 AQDTLALSVSMLARIWKPDTYFYNGKQSYLHTITTPNKFVRIYQNGRVLYSSRLTIK-AGCPMNL 237
            ::..|....:.|..||:||..|.|.|.|..|.:|..|.::.|:.:|::....|:.:| ....:.|
 Worm   314 SRPILVNDYTFLKMIWRPDPIFTNSKYSTFHKVTYLNFYLFIFPDGKIFMDMRVYLKPTAAQIVL 378

  Fly   238 ADFPMDIQKCPLKFGSFGYTTSDVIYRW-NKERPPVAIAEDMKLSQFDLVDCPAGNLTDIVYKAA 301
            ..:|.|.....||..|.|:|...|...| :.....:.|.:::|:.:..:
 Worm   379 CKYPHDNPAVSLKISSMGFTQDVVKLEWFSDTNDAIWIEKNVKIPELSI---------------- 427

  Fly   302 APRPQRRPFNNKDPPRPTSKVMTTFAGPAAKNQH------VRGTGLKLDKGAFGTGRDATGGSGS 360
                                          ::.|      ||.:|:
 Worm   428 ------------------------------RHLHPDTCNGVRKSGV------------------- 443

  Fly   361 TTGLSGTITLETNHPSEYSMLMVNFHLQRHMGNFLIQVYGPCCLLVVLSWVSFWLNREATADRVS 425
                             ||.|...|::.|.:|..:...|.|..:.||.||:|.||..|....|:.
 Worm   444 -----------------YSCLEAKFYMHREVGYHIANTYIPTAICVVFSWISVWLPEEFVEGRIF 491

  Fly   426 LGITTVLTMTFLGLEARTDLPKVSYPTALDFFVFLSFGFIFATILQFAVV 475
            :.:|..||::.....|:.:||||||..|:|.:...:..|:|.|:||..||
 Worm   492 VSLTVFLTLSAENNSAKEELPKVSYVKAIDIWFGFTSTFVFLTMLQALVV 541

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Grd	NP_524131.1	Neur_chan_LBD	110..326	CDD:280998	49/224 (22%)
		LIC	111..670	CDD:273305	89/380 (23%)
		Neur_chan_memb	398..667	CDD:280999	30/78 (38%)
lgc-44	NP_505954.2	Neur_chan_LBD	259..>417	CDD:280998	45/161 (28%)
		Neur_chan_memb	464..>550	CDD:280999	30/78 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810