Sequence 1: | NP_524131.1 | Gene: | Grd / 39984 | FlyBaseID: | FBgn0001134 | Length: | 686 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001345970.1 | Gene: | Gabra4 / 14397 | MGIID: | 95616 | Length: | 578 | Species: | Mus musculus |
Alignment Length: | 652 | Identity: | 204/652 - (31%) |
---|---|---|---|
Similarity: | 278/652 - (42%) | Gaps: | 212/652 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 108 NISELLDNLLRGYDNSIRPDFG--------------------------GPPATIEVDIMVRSMGP 146
Fly 147 ISEVDMTYSMDCYFRQSWVDKRLAFEGAQDTLALSVSMLARIWKPDTYFYNGKQSYLHTITTPNK 211
Fly 212 FVRIYQNGRVLYSSRLTIKAGCPMNLADFPMDIQKCPLKFGSFGYTTSDVIYRWNK--ERPPVAI 274
Fly 275 AEDMKLSQFDLVDCPAGNLTDIVYKAAAPRPQRRPFNNKDPPRPTSKVMTTFAGPAAKNQHVRGT 339
Fly 340 GLKLDKGAFGTGRDATGGSGSTTGLSGTITLETNHPSEYSMLMVNFHLQRHMGNFLIQVYGPCCL 404
Fly 405 LVVLSWVSFWLNREATADRVSLGITTVLTMTFLGLEARTDLPKVSYPTALDFFVFLSFGFIFATI 469
Fly 470 LQFAVVHYYTKYGSGECYFIIEELDSESGESETEPLTSDFRGSTESKIYEVIPLSMCAISMPPP- 533
Fly 534 -PTRLGMLTSRNRRPRNRRHGLWSMKLLGLFDWRRRRKPPRADSDED------------------ 579
Fly 580 EDDEQTQ-----------LRANEAPTTSAAAAAAQAAAQAARISP-PTGGRRRMSYYRREEMEA- 631
Fly 632 -RRKG--KRT--------------------PQYNSVSKIDRASRIVFPLLFILINVFYWYGYLSR 673
Fly 674 SS 675 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grd | NP_524131.1 | Neur_chan_LBD | 110..326 | CDD:280998 | 91/243 (37%) |
LIC | 111..670 | CDD:273305 | 200/642 (31%) | ||
Neur_chan_memb | 398..667 | CDD:280999 | 91/324 (28%) | ||
Gabra4 | NP_001345970.1 | Neur_chan_LBD | 13..565 | CDD:332142 | 201/645 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 199 | 1.000 | Domainoid score | I3055 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 373 | 1.000 | Inparanoid score | I2083 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1057372at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_105663 | |
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X127 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.960 |