Sequence 1: | NP_524131.1 | Gene: | Grd / 39984 | FlyBaseID: | FBgn0001134 | Length: | 686 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006532258.1 | Gene: | Gabra1 / 14394 | MGIID: | 95613 | Length: | 553 | Species: | Mus musculus |
Alignment Length: | 678 | Identity: | 213/678 - (31%) |
---|---|---|---|
Similarity: | 313/678 - (46%) | Gaps: | 178/678 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 DASTDLIAARSLSSHQGQRSNLRIFKLLISCCLLMLCIYPNAWPWSIGPGSGPFSVSADSIKGRG 79
Fly 80 DTHRLGEMGTSLSSSLPSSWLTQS-----NNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDI 139
Fly 140 MVRSMGPISEVDMTYSMDCYFRQSWVDKRLAFEGAQDTLALSVSMLARIWKPDTYFYNGKQSYLH 204
Fly 205 TITTPNKFVRIYQNGRVLYSSRLTIKAGCPMNLADFPMDIQKCPLKFGSFGYTTSDVIYRWNKE- 268
Fly 269 RPPVAIAED-MKLSQFDLVDCPAGNLTDIVYKAAAPRPQRRPFNNKDPPRPTSKVMTTFAGPAAK 332
Fly 333 NQHVRGTGLKLDKGAFGTGRDATGGSGSTTGLSGTITLETNHPSEYSMLMVNFHLQRHMGNFLIQ 397
Fly 398 VYGPCCLLVVLSWVSFWLNREATADRVSLGITTVLTMTFLGLEARTDLPKVSYPTALDFFVFLSF 462
Fly 463 GFIFATILQFAVVHYYTKYGSGECYFIIEELDSESGESETEPLTSDFRGSTESKIYEVIPLSMCA 527
Fly 528 ISMPPPPTRLGMLTSRNRRPRNRRHGLWSMKLLGLFDWRRRRKPPRADSDEDEDDEQTQLRANEA 592
Fly 593 PTTSAAAAAAQAAAQAARISPPTGGRRRMSYYRREEMEARRK---GKRTPQYNSVSKIDRASRIV 654
Fly 655 FPLLFILINVFYWYGYLSRSSRILANTP 682 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grd | NP_524131.1 | Neur_chan_LBD | 110..326 | CDD:280998 | 89/217 (41%) |
LIC | 111..670 | CDD:273305 | 185/563 (33%) | ||
Neur_chan_memb | 398..667 | CDD:280999 | 78/271 (29%) | ||
Gabra1 | XP_006532258.1 | LIC | 105..539 | CDD:273305 | 191/599 (32%) |
LGIC_ECD_GABAAR_A1 | 153..346 | CDD:349835 | 92/268 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 199 | 1.000 | Domainoid score | I3055 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 373 | 1.000 | Inparanoid score | I2083 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1057372at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X127 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.060 |