Protein Alignment Grd and gabrp

DIOPT Version :9

• Sequence 1: NP_524131.1
• Gene: Grd / 39984
• FlyBaseID: FBgn0001134
• Length: 686
• Species: Drosophila melanogaster
• Sequence 2: XP_017948119.2
• Gene: gabrp / 100498164
• XenbaseID: XB-GENE-1012959
• Length: 401
• Species: Xenopus tropicalis
• Alignment Length: 559
• Identity: 135/559 - (24%)
• Similarity: 225/559 - (40%)
• Gaps: 172/559 - (30%)

  Fly   116 LLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDKRLAFEGAQDTLAL 180
            :::.|:..:||.|...|..|.|.:.|.|:..:||.:|.|:.....||.|.|:||.|||.: ::.|
 Frog    10 IMKDYNKYLRPKFNEKPIEIAVSLEVASIDAVSEENMDYTATINLRQRWTDERLVFEGNR-SITL 73

  Fly   181 SVSMLARIWKPDTYFYNGKQSYLHTITTPNKFVRIYQNGRVLYSSRLTIKAGCPMNLADFPMDIQ 245
            ...::..:|.||||..:.|:|:||.:|..|:.||::.||.|||:.|:|....|.|:|..:|||.|
 Frog    74 DARLVESLWVPDTYIVDSKKSFLHDVTVENRLVRLFANGTVLYAIRITTTVACKMDLTKYPMDRQ 138

  Fly   246 KCPLKFGSFGYTTSDVIYRWNKERPPVAIAEDMKLSQFDLVDCPAGNLTDIVYKAAAPRPQRRPF 310
            .|.|:..|:||:..|:.|.|.:....|...:.::|:|:.:
 Frog   139 TCKLQLESWGYSEKDLTYVWMRANDSVRGMDHLQLAQYTV------------------------- 178

  Fly   311 NNKDPPRPTSKVMTTFAGPAAKNQHVRGTGLKLDKGAFGTGRDATGGSGSTTGLSGTITLETNHP 375
                     .:..||.:                      .|:|.||
 Frog   179 ---------EQYYTTNS----------------------IGKDETG------------------- 193

  Fly   376 SEYSMLMVNFHLQRHMGNFLIQVYGPCCLLVVLSWVSFWLNREATADRVSLGITTVLTMTFLGLE 440
             .|..|.:.|.|:|::..|:::.|.|..|||||||||||::..:...|...|:||||.||.:.:.
 Frog   194 -NYPRLALCFILRRNVVYFILETYIPSALLVVLSWVSFWISMSSVPARTCFGVTTVLAMTTIMMG 257

  Fly   441 ARTDLPKVS-YPTALDFFVFLSFGFIFATILQFAVVHYYTKYGSGECYFIIEELDSESGESETEP 504
            :|.:.|..: ...|:|.::.:.|.|:|..:|::|..||        |    .||:|...:.:
 Frog   258 SRFNFPTANCIIKAIDVYLGICFSFVFGALLEYAFAHY--------C----SELNSAVNKEK--- 307

  Fly   505 LTSDFRGSTESKIYEVIPLSMCAISMPPPPTRLGMLTSRNRRPRNRRHGLWSMKLLGLFDWRRRR 569
                .:.|.|...:::..:.:..
 Frog   308 ----IKNSLEEPEHDISSVLIAC------------------------------------------ 326

  Fly   570 KPPRADSDEDEDDEQTQLRANEAPTTSAAAAAAQAAAQAARISPPTGGRRRMSYYRREEMEARRK 634
                         :..||...|..|.:|               |.....:....::   :..:.|
 Frog   327 -------------DSKQLNRKENQTENA---------------PEKNSLKNSVIFK---LWLKIK 360

  Fly   635 GKRTPQYN--SVSKIDRASRIVFPLLFILINVFYWYGYL 671
            ..|..::|  :...:||.||.||||:|::||:.||..||
 Frog   361 IIRLKKFNVTNPENVDRYSRTVFPLIFLIINIIYWTYYL 399

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Grd	NP_524131.1	Neur_chan_LBD	110..326	CDD:280998	62/209 (30%)
		LIC	111..670	CDD:273305	133/556 (24%)
		Neur_chan_memb	398..667	CDD:280999	58/271 (21%)
gabrp	XP_017948119.2	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000