Protein Alignment Grd and glra3

DIOPT Version :9

• Sequence 1: NP_524131.1
• Gene: Grd / 39984
• FlyBaseID: FBgn0001134
• Length: 686
• Species: Drosophila melanogaster
• Sequence 2: XP_002933371.1
• Gene: glra3 / 100488938
• XenbaseID: XB-GENE-1011160
• Length: 449
• Species: Xenopus tropicalis
• Alignment Length: 566
• Identity: 174/566 - (30%)
• Similarity: 243/566 - (42%)
• Gaps: 178/566 - (31%)

  Fly   110 SELLDNLL---RGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDKRLAF 171
            |:.||.|:   .|||..|||:|.|||..:..:|.|.|.|.|:|..|.|.::.:.||.|.|.|||:
 Frog    44 SDFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFVNSFGSIAETTMDYRLNIFLRQKWNDPRLAY 108

  Fly   172 -EGAQDTLALSVSMLARIWKPDTYFYNGKQSYLHTITTPNKFVRIYQNGRVLYSSRLTIKAGCPM 235
             |...|:|.|..|||..|||||.:|.|.|.:..|.:||.||.:||:::|.||||.|||:...|||
 Frog   109 SEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKDGNVLYSIRLTLTLSCPM 173

  Fly   236 NLADFPMDIQKCPLKFGSFGYTTSDVIYRWNKERPPVAIAEDMKLSQFDLVDCPAGNLTDIVYKA 300
            :|.:||||:|.|.::..|||||.:|:|:.| :|..||.||:.:.|.||.|.:
 Frog   174 DLKNFPMDVQTCIMQLESFGYTMNDLIFEW-QENGPVQIADGLTLPQFVLKE------------- 224

  Fly   301 AAPRPQRRPFNNKDPPRPTSKVMTTFAGPAAKNQHVRGTGLKLDKGAFGTGRDATGGSGSTTGLS 365
                       .||                          |:.....:.||:
 Frog   225 -----------EKD--------------------------LRYCTKHYNTGK------------- 239

  Fly   366 GTITLETNHPSEYSMLMVNFHLQRHMGNFLIQVYGPCCLLVVLSWVSFWLNREATADRVSLGITT 430
                        ::.:.|.|||:|.||.:|||:|.|..|:|:|||||||:|.:|...||:|||||
 Frog   240 ------------FTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITT 292

  Fly   431 VLTMTFLGLEARTDLPKVSYPTALDFFVFLSFGFIFATILQFAVVHYYTKYGSGECYFIIEELDS 495
            |||||.....:|..||||||..|:|.::.:...|:|:.:|::|.|::.
 Frog   293 VLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFV----------------- 340

  Fly   496 ESGESETEPLTSDFRGSTESKIYEVIPLSMCAISMPPPPTRLGMLTSRNRRPRNRRHGLWSMKLL 560
                                                                 :|:|       .
 Frog   341 -----------------------------------------------------SRQH-------K 345

  Fly   561 GLFDWRRRRKPPRADSDEDEDDEQTQLRA-NEAPTTSAAAAAAQAAAQAARISPPTGGRRRMSYY 624
            .|..:||:||   .|.|:|..:.:....| ...|...|...........|..:|.|
 Frog   346 ELLRFRRKRK---KDRDDDVRESRFSFTAYGMGPCLQAKDGVNPKGPLNAPPAPKT--------- 398

  Fly   625 RREEMEARRKGKRTPQYNSVSKIDRASRIVFPLLFILINVFYWYGY 670
             .|||       |....:...|||..||..|||.|::.|:|||..|
 Frog   399 -HEEM-------RKVFIDRAKKIDTLSRACFPLAFLIFNIFYWVIY 436

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Grd	NP_524131.1	Neur_chan_LBD	110..326	CDD:280998	88/219 (40%)
		LIC	111..670	CDD:273305	172/563 (31%)
		Neur_chan_memb	398..667	CDD:280999	70/269 (26%)
glra3	XP_002933371.1	LIC	12..436	CDD:273305	173/564 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000