Sequence 1: | NP_524131.1 | Gene: | Grd / 39984 | FlyBaseID: | FBgn0001134 | Length: | 686 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031754593.1 | Gene: | gabra6 / 100488862 | XenbaseID: | XB-GENE-6049732 | Length: | 455 | Species: | Xenopus tropicalis |
Alignment Length: | 590 | Identity: | 196/590 - (33%) |
---|---|---|---|
Similarity: | 274/590 - (46%) | Gaps: | 177/590 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 100 LTQSNNHA-NISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFRQS 163
Fly 164 WVDKRLAFEGAQDTLALSVSMLARIWKPDTYFYNGKQSYLHTITTPNKFVRIYQNGRVLYSSRLT 228
Fly 229 IKAGCPMNLADFPMDIQKCPLKFGSFGYTTSDVIYRWNK------ERPPVAIAEDMKLSQFDLVD 287
Fly 288 CPAGNLTDIVYKAAAPRPQRRPFNNKDPPRPTSKVMTTFAGPAAKNQHVRGTGLKLDKGAFGTGR 352
Fly 353 DATGGSGSTTGLSGTITLETNHPSEYSMLMVNFHLQRHMGNFLIQVYGPCCLLVVLSWVSFWLNR 417
Fly 418 EATADRVSLGITTVLTMTFLGLEARTDLPKVSYPTALDFFVFLSFGFIFATILQFAVVHYYTKYG 482
Fly 483 SGECYFIIEE---LDSESGESETEPLT-SDFRGSTESKIYEVIPLSMCAISMPPPPTRLGMLTSR 543
Fly 544 NRRPRNRRHGLWSMKLLGLFDWRRRRKPPRADSDEDEDDEQTQLRANE---APTTSAAAAAAQAA 605
Fly 606 AQAARISPPTGGRRRMSYYRREEMEARRKGKRTPQYNSVSKIDRASRIVFPLLFILINVFYWYGY 670
Fly 671 LSRSS 675 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grd | NP_524131.1 | Neur_chan_LBD | 110..326 | CDD:280998 | 98/221 (44%) |
LIC | 111..670 | CDD:273305 | 188/571 (33%) | ||
Neur_chan_memb | 398..667 | CDD:280999 | 71/275 (26%) | ||
gabra6 | XP_031754593.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 203 | 1.000 | Domainoid score | I2891 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 373 | 1.000 | Inparanoid score | I2061 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1057372at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X127 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.070 |