DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and GLR2.5

DIOPT Version :9

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001332219.1 Gene:GLR2.5 / 830991 AraportID:AT5G11210 Length:918 Species:Arabidopsis thaliana


Alignment Length:736 Identity:135/736 - (18%)
Similarity:238/736 - (32%) Gaps:265/736 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VEMLNQ-------NGIFSQYIDVQNPDNLANVHKEYLDSDLVRLGVFLDLGCDKAELVTNQSSRA 94
            ::||::       ||| :..:.:....:|.|:|..        |||.......|..|......:.
plant   249 IDMLSKGYVWIVTNGI-ADLMSIMGESSLVNMHGV--------LGVKTYFAKSKELLHLEARWQK 304

  Fly    95 RLYNQNLH----WLLYDEAGNFTKLTQLFEGANLSLNADVTYVSREDEERFILHDVYNKGSHLGG 155
            |...:.|:    | .||.|.......:.....|:|.|......||:|    |..|:...|..|.|
plant   305 RFGGEELNNFACW-AYDAATALAMSVEEIRHVNMSFNTTKEDTSRDD----IGTDLDELGVALSG 364

  Fly   156 KLNITVDQTLQCNRSHCQVKEYLSELHLRPRLQHRMD-LSSVTFR-------------LAALVSV 206
                                         |:|   :| ||:|:|:             .|....:
plant   365 -----------------------------PKL---LDALSTVSFKGVAGRFQLKNGKLEATTFKI 397

  Fly   207 LPINSSEEELLEFLNSD----RDSHMDSISRIGNRLIMHTQEILGFKLHYIWCGT-------WSV 260
            :.|..|.|..:.|..|.    :...:|.:|....||           ...||.|.       |..
plant   398 INIEESGERTVGFWKSKVGLVKSLRVDKVSHSSRRL-----------RPIIWPGDTIFVPKGWEF 451

  Fly   261 -------------QDAFGGAIGMLTNESAELCTT---------------PFVPSW---------- 287
                         :|.|...:.:..:|:..:.|.               |:..|:          
plant   452 PTNAKKLRIAVPKKDGFNNFVEVTKDENTNVPTVTGFCIDVFNTVMSQMPYAVSYEYIPFDTPDG 516

  Fly   288 -----------------------------NRLHYLH---PMTEQAQFRAVCMFRTPHNAGIKAA- 319
                                         ||.||:.   |.:|..     .:|..|...|.:.. 
plant   517 KPRGSYDEMVYNVFLGEFDGAVGDTTILANRSHYVDFALPYSETG-----IVFLVPVKDGKEKGE 576

  Fly   320 -VFLEPFMPSVWFAFAGLLIFAGVLLWMIFHL---ERHWMQRCLDFIPSLLSSCLISFGAACIQG 380
             |||:|....:|...|...::.|:::| ||..   |....|..:|.|     |.:..|..:.:..
plant   577 WVFLKPLTKELWLVTAASFLYIGIMVW-IFEYQADEEFREQMIIDKI-----SSVFYFSFSTLFF 635

  Fly   381 SYLMP-KSAGGRLAFIAVMLTSFLMYNYYTSIVVSTLLGSPVRSNIRTIQQLADSSLDVGFDTVP 444
            ::..| :|...|:..:.......::...||:.:.|.|....:|..:|.:..|..|.:::|:.|..
plant   636 AHRRPSESFFTRVLVVVWCFVLLILTQSYTATLTSMLTVQELRPTVRHMDDLRKSGVNIGYQTGS 700

  Fly   445 FT--------------KTYLVSSPRPDIRSLYKQKVESKRDPNSVWLSPEEGVIRVRDQPGFV-- 493
            ||              |||  :||. ::|.|:..|            |...|:....|:..::  
plant   701 FTFERLKQMRFDESRLKTY--NSPE-EMRELFLHK------------SSNGGIDAAFDEVAYIKL 750

  Fly   494 ----YTSEASFMYHFVEKHY--------LPRE---ISDLNEIILRPESAVYGMVHLNSTYRQLLT 543
                |.||    |..:|..:        .|..   :||::                    ||:|.
plant   751 FMAKYCSE----YSIIEPTFKADGFGFAFPLGSPLVSDIS--------------------RQILN 791

  Fly   544 QLQVRMLETGITSK--QSRFF--SKTKLHTFSNSFVIQVGMEYAAPLFISLLVAYFLALLILILE 604
                  :..|...|  ::::|  .|..|.:.::...||:.......||   |:.:.:::::|:|.
plant   792 ------ITEGDAMKAIENKWFLGEKHCLDSTTSDSPIQLDHHSFEALF---LIVFVVSVILLLLM 847

  Fly   605 ICWARYAKKKF--STIIPQNQ 623
            :....|.:::.  |..:|.:|
plant   848 LASRGYQERQHNASPNLPNDQ 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 49/259 (19%)
GLR2.5NP_001332219.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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