DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and GLR1.1

DIOPT Version :9

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_187061.1 Gene:GLR1.1 / 819566 AraportID:AT3G04110 Length:808 Species:Arabidopsis thaliana


Alignment Length:458 Identity:82/458 - (17%)
Similarity:147/458 - (32%) Gaps:175/458 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 LPINSSEEELLEFLNSDRDSH---MDSISRIGNRLIMHTQEILGFKLHYIWCGTWSVQDAFGGAI 268
            :|...:.:.|...|::.||.:   :..|:...||.:     .:.|.|.|...|           |
plant   472 IPYRGNNDNLAYLLSTQRDKYDAAVGDITITSNRSL-----YVDFTLPYTDIG-----------I 520

  Fly   269 GMLT--NESAELCTTPFVPSWNRLHYLHPMTEQAQFRAVCMFRTPHNAGIKAAVFLEPFMPSVWF 331
            |:||  .:|..:.|                                        |.:||..|:|.
plant   521 GILTVKKKSQGMWT----------------------------------------FFDPFEKSLWL 545

  Fly   332 AFAGLLIFAGVLLWMIFHLER--------HWMQRCLDFIPSLLSSCLISFGAACIQGSY--LMPK 386
            |.....:..|:::|::   ||        .|.|:.         |.::.||.:.|..::  .:.|
plant   546 ASGAFFVLTGIVVWLV---ERSVNPEFQGSWGQQL---------SMMLWFGFSTIVFAHREKLQK 598

  Fly   387 SAGGRL----AFIAVMLTSFLMYNYYTSIVVSTL------------------LGSPVRSNIRTIQ 429
            .:...|    .|:.::|||....|..::..:|.:                  ||| :.:.....|
plant   599 MSSRFLVIVWVFVVLILTSSYSANLTSTKTISRMQLNHQMVFGGSTTSMTAKLGS-INAVEAYAQ 662

  Fly   430 QLADSSLDVGFDTVPFTKTYLVSSPRPDIRSLYKQKVESKRDPNSVWLSPEEGVIRVRDQPGFVY 494
            .|.|.:|:...:.:|:....:.:.|...:.:                       .||.:..||  
plant   663 LLRDGTLNHVINEIPYLSILIGNYPNDFVMT-----------------------DRVTNTNGF-- 702

  Fly   495 TSEASFMYH----FVEKHYLPREISDLNEIILRPESAVYGMV-HLNSTYRQLLTQLQV-----RM 549
                .||:.    .|.|  :.|||:.|..:         ||: .:...:.|.|..|.|     .:
plant   703 ----GFMFQKGSDLVPK--VSREIAKLRSL---------GMLKDMEKKWFQKLDSLNVHSNTEEV 752

  Fly   550 LETGITSKQSRFFSKTKLHTFSNSFVIQVGMEYAAPLFISLLVAYFLALLILILEICWARYAKKK 614
            ..|....:.|:.|:..:|.                .|||   :|....:|:|.|.:...|....:
plant   753 ASTNDDDEASKRFTFRELR----------------GLFI---IAGAAHVLVLALHLFHTRQEVSR 798

  Fly   615 FST 617
            ..|
plant   799 LCT 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 48/266 (18%)
GLR1.1NP_187061.1 PBP1_GABAb_receptor 31..397 CDD:107361
ANF_receptor 45..377 CDD:279440
Periplasmic_Binding_Protein_Type_2 421..737 CDD:304360 65/373 (17%)
Lig_chan 542..781 CDD:278489 56/310 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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