DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and GLR5

DIOPT Version :9

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_565744.1 Gene:GLR5 / 817801 AraportID:AT2G32400 Length:921 Species:Arabidopsis thaliana


Alignment Length:783 Identity:153/783 - (19%)
Similarity:259/783 - (33%) Gaps:270/783 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LVEMLNQNGIFSQYIDVQNPDNLANVHKEYLDSDL----------VRLGVFLDLGCDKAELVTNQ 90
            ||:::|..| :.:.|.|.:.|.|.......||.:|          |.|.|..|     .:.:||.
plant   154 LVDLINFYG-WKEVISVYSDDELGRNGVSALDDELYKKRSRISYKVPLSVHSD-----EKFLTNA 212

  Fly    91 SSRARLYNQNLHWL---------LYDEAGNFTKLTQLFEGANLSLNAD---VTYVSREDE---ER 140
            .::::.....::.|         ::|.|.....:|..:    :.|..|   ||..|..|:   :|
plant   213 LNKSKSIGPRVYILHFGPDPLLRIFDIAQKLQMMTHEY----VWLATDWLSVTLDSLSDKGTLKR 273

  Fly   141 FILHDVYNKGSHLGGKLNIT-VDQTLQCNRS------HCQ---------VKEYLSE--------- 180
              |..|.....|:...:.:. ....||.|||      |..         ::|.|:|         
plant   274 --LEGVVGLRQHIPESVKMEHFTHKLQSNRSMNAYALHAYDTVWMIAHGIEELLNEGINITFSYS 336

  Fly   181 ---LHLRPRLQHRMDLSSVTFRLAALVSVLPINSSE---EELL---------------------- 217
               ||.|....|   |..:.|          .||.|   |:||                      
plant   337 EKLLHARGTKLH---LEKIKF----------FNSGELLLEKLLKVNFTGIAGQVQFGSGRNVIGC 388

  Fly   218 --EFLNSDR-DSHMDSI-SRIGNRLIM-----HTQEILGF----KLHYI-WCG-------TWSVQ 261
              |.:|.:: |.|.... |:.|...::     |:|:...|    ||..| |.|       .|.:.
plant   389 DYEIINVNKTDVHTVGFWSKNGGFSVVAPKTRHSQKKTSFVSDEKLGDITWPGGGREKPRGWVIA 453

  Fly   262 DAFG----------GAIGMLTNESAE------LCTTPFV-----------------------PSW 287
            |:..          ..:..:|.|...      .|...|:                       |::
plant   454 DSADPLKIVVPRRVSFVEFVTEEKNSSHRIQGFCIDVFIEALKFVPYSVPYIFEPFGNGHSSPNY 518

  Fly   288 NRLHYLHPMTEQAQFRAV------------CMFRTPH-NAGIKAA----------VFLEPFMPSV 329
            |  |.:..:|:.....||            ..|..|: :.|:...          :||.||...:
plant   519 N--HLIQMVTDGVYDAAVGDIAIVPSRSKLVDFSQPYASTGLVVVIPANDDNATWIFLRPFTSRL 581

  Fly   330 WFAFAGLLIFAGVLLWMIFHLERHWMQRCLDF----IPSLLSSCLISFGAACIQGSYLMPK---- 386
            |.......:...|::|::.|....      ||    ...|.:..|.||       |.|..:    
plant   582 WCVVLVSFLVIAVVIWILEHRINE------DFRGPPRRQLSTMLLFSF-------STLFKRNQED 633

  Fly   387 --SAGGRLAFIAVMLTSFLMYNYYTSIVVSTLLGSPVRSNIRTIQQLADSSLDVGFDTVPFTKTY 449
              |...||..|..:....::...||:.:.|.|....:.|.|..|..|..|.:.:|:....||..|
plant   634 TISNLARLVMIVWLFLLMVLTASYTANLTSILTVQQLPSAITGIDSLRASEVPIGYQAGTFTLEY 698

  Fly   450 LVSS---------PRPDIRSLYKQKVESKRDPNSVWLSPEEGVIRVRDQ-----------PGFVY 494
            |..|         |. |....|::.:  |..|.: |    .||..:.|:           .||..
plant   699 LTYSLGMARSRLVPL-DSTEEYEKAL--KLGPTN-W----GGVAAIVDELPYIELFLAERTGFKI 755

  Fly   495 TSEASFMYH---FVEKHYLPREISDLNEIILRPESAVYGMVHLNSTYRQLLTQLQVRML-ETGIT 555
            ..| .||:.   |..|...|..| |::..||:          |:.|.:  |.:::.:.| :|...
plant   756 VGE-PFMHRGWGFAFKRDSPLAI-DMSTAILK----------LSETRK--LQEIRKKWLCKTNCA 806

  Fly   556 SKQSRFFSKTKLH--TFSNSFVIQVGMEYAAPLFISLLVAYFLALLILILEICWARYAKKKFSTI 618
            .|.:......:||  :|...:::          .|::.|:.||..::.::. .:.||.:.:.::.
plant   807 GKSNWNPEPNQLHLKSFKGLYLV----------CIAITVSAFLVFVLRMIR-QFVRYRRMERTSS 860

  Fly   619 IPQ 621
            :|:
plant   861 MPR 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 56/258 (22%)
GLR5NP_565744.1 PBP1_GABAb_receptor 32..416 CDD:107361 58/286 (20%)
ANF_receptor 46..396 CDD:279440 54/266 (20%)
GluR_Plant 458..800 CDD:270404 72/378 (19%)
Lig_chan 581..832 CDD:278489 61/295 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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