DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and GLR2.9

DIOPT Version :9

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001325277.1 Gene:GLR2.9 / 817458 AraportID:AT2G29100 Length:942 Species:Arabidopsis thaliana


Alignment Length:621 Identity:117/621 - (18%)
Similarity:202/621 - (32%) Gaps:201/621 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 EAGNF-TKLTQLFEGANLSLNAD-----------VTYVSREDEERFILHDVYNKGSHLGGKLNIT 160
            |.|:| .:..:.||..|.|:..|           :|.:::..|:.......|:.||         
plant   287 ELGDFRLRWKRTFEKENPSMRDDLNVFALWAYDSITALAKAVEKANTKSLWYDNGS--------- 342

  Fly   161 VDQTLQCNRS---HCQVKEYLSELHLRPRLQHRMDLSSVTFR-LAALVSVL--PINSSEEELLEF 219
               ||..||:   :..|..|      .|.||..  .|.|.|. ||....::  .:.|.:.|::.|
plant   343 ---TLSKNRTDLGNVGVSLY------GPSLQKA--FSEVRFNGLAGEFKLIDGQLQSPKFEIINF 396

  Fly   220 LNSD---------RDSHMDSISRIGNRLIMHTQEILGFKLHYIWCGT-------WSVQ------- 261
            :.::         ||..||:.|        ..::.||   ..||.|.       |.:.       
plant   397 VGNEERIIGFWTPRDGLMDATS--------SNKKTLG---PVIWPGKSKIVPKGWEIPGKKLRVG 450

  Fly   262 --------DAFGGAIGMLTNE-----------SAELCTTPF--VP-------------------- 285
                    |.....|..:||:           .|.|...|:  :|                    
plant   451 VPMKKGFFDFVKVTINPITNKKTPTGYAIEIFEAALKELPYLVIPEYVSFESPNNYNNLVYQVYD 515

  Fly   286 -SW-----------NRLHYLH---PMTEQAQFRAVCMFRTPHNAGIKAAVFLEPFMPSVWFAFAG 335
             :|           ||..|..   |.||..   ...|.....|......|||||:...:|.....
plant   516 KTWDAVVGDITITANRSLYADFTLPFTESG---VSMMVPVRDNENKDTWVFLEPWSLELWVTTGC 577

  Fly   336 LLIFAGVLLWMIFHLERHWMQRCLDFIP----SLLSSCLISFGAACIQGSYLMPKSAGGRLAFIA 396
            ..:|.|.::|:..|...      .||..    .:.:|...||....    :...::....||...
plant   578 FFVFIGFVVWLFEHRVN------TDFRGPPQYQIGTSLWFSFSTMV----FAHRENVVSNLARFV 632

  Fly   397 VMLTSF---LMYNYYTSIVVSTLLGSPVRSNIRTIQQLADSSLDVGFDTVPFTKTYLVSSPRPDI 458
            |::..|   ::...||:.:.|.|....::..:..:..|..:...||:....|.|..|:.      
plant   633 VVVWCFVVLVLTQSYTASLTSFLTVQSLQPTVTNVNDLIKNRDCVGYQGGAFVKDILLG------ 691

  Fly   459 RSLYKQKV---ESKRDPNSVWLS--PEEGVIRVRDQPGFV--YTSEASFMYHFVEKHY------- 509
            ...::.::   :|.:|.:.: ||  ..:|:....|:..::  ..|::...|..||..:       
plant   692 LGFHEDQLKPFDSAKDADDL-LSKGKSKGIAAAFDEVAYLKAILSQSCSKYVMVEPTFKTGGFGF 755

  Fly   510 -LPREISDLNEIILRPESAVYGMVHLNSTYRQLLTQLQVRMLE---------TGITSKQSRFFSK 564
             .|:.         .|.:..:....||.|...:..|::.|...         |.::|      ::
plant   756 AFPKN---------SPLTGEFSRAILNLTQNNVTQQIEDRWFPKKNDCPDPMTALSS------NR 805

  Fly   565 TKLHTFSNSFVIQVGMEYAAPLFISLLVAYFLALLI 600
            ..|.:|...|:|.     ...:..||||  |:||.:
plant   806 LNLSSFLGLFLIA-----GTAISFSLLV--FVALFL 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 41/255 (16%)
GLR2.9NP_001325277.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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