DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and grik1a

DIOPT Version :10

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_009303592.2 Gene:grik1a / 798001 ZFINID:ZDB-GENE-030131-6502 Length:919 Species:Danio rerio


Alignment Length:439 Identity:93/439 - (21%)
Similarity:165/439 - (37%) Gaps:111/439 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 LIMHTQEILGF--KLHYIWCGTWSVQDAFG---GAIGMLTNESAELCTTPFVPSWNR---LHYLH 294
            |:.....||||  ::..:..|.:..|:..|   |.:..|.:..|:|...|...::.|   :.:..
Zfish   482 LLKELSNILGFTYEVKLVTDGKYGAQNDKGEWNGMVRELIDHIADLAVAPLTITYVREKVIDFSK 546

  Fly   295 P-MTEQAQFRAVCMFRTPHNAGIKAAVFLEPFMPSVWFAFAGLLIFAGVLLWMIFHLERHWMQRC 358
            | ||    .....::|.|:........||.|..|.:|...  ||...||.. ::|.:.|      
Zfish   547 PFMT----LGISILYRKPNGTNPGVFSFLNPLTPDIWMYV--LLACLGVSC-VLFVIAR------ 598

  Fly   359 LDFIP--------------------SLLSSCLISFGAACI--QGSYLMPKSAGGRLA------FI 395
              |.|                    :||:|  :.||.|.:  |||.||||:...|:.      |.
Zfish   599 --FTPYEWYNPHPCNPSSEVVENNFTLLNS--LWFGVAALMRQGSELMPKALSTRILGGIWWFFT 659

  Fly   396 AVMLTSFLMYNYYTSIVVSTLLGSPVRSNIRTIQQLA-DSSLDVGF----DTVPFTKTYLVSSPR 455
            .::::|      ||:.:.:.|....:.|.|.:...|| .:.::.|.    .|:.|.|...:|:  
Zfish   660 LIIISS------YTANLAAFLTVERMDSPIDSADDLAKQTRIEYGAVRDGSTMTFFKKSKIST-- 716

  Fly   456 PDIRSLYKQ--KVESKRDPNSVWLSPEEGVIRVRDQPGFVYTSEASFMYHFVEKHYLPREISDLN 518
                  |::  ...|.|...::..:.::|:.|       |.|::.:.:.......|:.:...:|.
Zfish   717 ------YEKMWAFMSSRKNTALVKNSKDGITR-------VLTTDYALLMESTSIEYITQRNCNLT 768

  Fly   519 EIILRPESAVYGM-VHLNSTYRQLLTQLQVRMLETGITSKQSRFFSKTKLHTFSNSF-------- 574
            ::....:|..||: ..:.|.||..:|...:::.|.|            |||.....:        
Zfish   769 QVGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQEEG------------KLHMMKEKWWRGNGCPE 821

  Fly   575 -----VIQVGMEYAAPLFISLLVAYFLALLILILEICWARYAKKKFSTI 618
                 ...:|:|....:||.|.....|::.:.|.|..   |...|.|.|
Zfish   822 EDSKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFI---YKSHKNSDI 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..>508 CDD:459656 44/214 (21%)
grik1aXP_009303592.2 None

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