DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and grik1a

DIOPT Version :9

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_009303592.1 Gene:grik1a / 798001 ZFINID:ZDB-GENE-030131-6502 Length:919 Species:Danio rerio


Alignment Length:439 Identity:93/439 - (21%)
Similarity:165/439 - (37%) Gaps:111/439 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 LIMHTQEILGF--KLHYIWCGTWSVQDAFG---GAIGMLTNESAELCTTPFVPSWNR---LHYLH 294
            |:.....||||  ::..:..|.:..|:..|   |.:..|.:..|:|...|...::.|   :.:..
Zfish   482 LLKELSNILGFTYEVKLVTDGKYGAQNDKGEWNGMVRELIDHIADLAVAPLTITYVREKVIDFSK 546

  Fly   295 P-MTEQAQFRAVCMFRTPHNAGIKAAVFLEPFMPSVWFAFAGLLIFAGVLLWMIFHLERHWMQRC 358
            | ||    .....::|.|:........||.|..|.:|...  ||...||.. ::|.:.|      
Zfish   547 PFMT----LGISILYRKPNGTNPGVFSFLNPLTPDIWMYV--LLACLGVSC-VLFVIAR------ 598

  Fly   359 LDFIP--------------------SLLSSCLISFGAACI--QGSYLMPKSAGGRLA------FI 395
              |.|                    :||:|  :.||.|.:  |||.||||:...|:.      |.
Zfish   599 --FTPYEWYNPHPCNPSSEVVENNFTLLNS--LWFGVAALMRQGSELMPKALSTRILGGIWWFFT 659

  Fly   396 AVMLTSFLMYNYYTSIVVSTLLGSPVRSNIRTIQQLA-DSSLDVGF----DTVPFTKTYLVSSPR 455
            .::::|      ||:.:.:.|....:.|.|.:...|| .:.::.|.    .|:.|.|...:|:  
Zfish   660 LIIISS------YTANLAAFLTVERMDSPIDSADDLAKQTRIEYGAVRDGSTMTFFKKSKIST-- 716

  Fly   456 PDIRSLYKQ--KVESKRDPNSVWLSPEEGVIRVRDQPGFVYTSEASFMYHFVEKHYLPREISDLN 518
                  |::  ...|.|...::..:.::|:.|       |.|::.:.:.......|:.:...:|.
Zfish   717 ------YEKMWAFMSSRKNTALVKNSKDGITR-------VLTTDYALLMESTSIEYITQRNCNLT 768

  Fly   519 EIILRPESAVYGM-VHLNSTYRQLLTQLQVRMLETGITSKQSRFFSKTKLHTFSNSF-------- 574
            ::....:|..||: ..:.|.||..:|...:::.|.|            |||.....:        
Zfish   769 QVGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQEEG------------KLHMMKEKWWRGNGCPE 821

  Fly   575 -----VIQVGMEYAAPLFISLLVAYFLALLILILEICWARYAKKKFSTI 618
                 ...:|:|....:||.|.....|::.:.|.|..   |...|.|.|
Zfish   822 EDSKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFI---YKSHKNSDI 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 54/260 (21%)
grik1aXP_009303592.1 Periplasmic_Binding_Protein_Type_1 37..432 CDD:299141
ANF_receptor 57..398 CDD:279440
Periplasmic_Binding_Protein_Type_2 446..815 CDD:304360 81/382 (21%)
Lig_chan 577..846 CDD:278489 63/314 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591209
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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