DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and si:ch211-251b21.1

DIOPT Version :9

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001138274.1 Gene:si:ch211-251b21.1 / 571720 ZFINID:ZDB-GENE-060809-5 Length:458 Species:Danio rerio


Alignment Length:416 Identity:90/416 - (21%)
Similarity:156/416 - (37%) Gaps:90/416 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 MDSISRIGNRLIMHTQEILGFK--LHYIWCGTWSVQDAFG---GAIGMLTNESAELCTTPFVPSW 287
            :|.:|.|.|:        ||||  :|.:..|.:...|..|   |.||.:....|::...      
Zfish    48 IDMLSAISNK--------LGFKYDVHLVKDGRYGKTDDSGNWNGMIGEVVRGEADIAVA------ 98

  Fly   288 NRLHYLHPMTEQAQFRAVCMFRTPH-NAGIKAAV-------------FLEPFMPSVWFAFAGLLI 338
                   |:|..||..||.....|. ..|:...:             .|:.|...:|.......:
Zfish    99 -------PLTLTAQREAVVDMSKPFMQTGLSFIMRKDLGSDDSQFLSLLKLFSTEMWMGVLVAYL 156

  Fly   339 FAGVLLWMIFHLER-HWMQRCLDFIPSLLS-SCLISFGAACIQGSYLMPKSAGGRLAFIAVMLTS 401
            ...:.::::..:.. .|.|...|.....|| |...:.||..:||:...||:..||:......:.|
Zfish   157 LTSICIFLVSRISPCEWEQPEKDNNSFTLSHSFWYTVGALTLQGAGPHPKALSGRVITSIWWIFS 221

  Fly   402 FLMYNYYTSIVVSTLLGSPVRSNIRTIQQLADSSLDVGFDTVPFTKT--YLVSSPRPDIRSLYKQ 464
            .::...|.:.:...|.....:.:|:|.:.||:.:: :.:.|:..:.:  :..:|..|....:|  
Zfish   222 LVLLACYFANLSLWLHSDNQQLSIKTFEDLANQNV-IEYGTIKDSSSFNFFKNSNNPTYHRIY-- 283

  Fly   465 KVESKRDPNSVWLSPEEGVIRVRDQPGFVYTSEASFMYHFV-EKHYLPREISDLNEIILRPESAV 528
              |..::..|..|:..||..|.  |.|         .|.|: |...|...::....:...||  :
Zfish   284 --EHIKEAQSYSLNAAEGFRRA--QKG---------NYAFIGESVSLDLAVARYCNLTRAPE--I 333

  Fly   529 YGM------VHLNSTYRQLLTQLQVRMLETGITSKQSRFFSKTKLHTFSNSFVIQVGMEYAAPL- 586
            .||      ..|.|   .|:..|.|.:|....:.:...|.||    .:::|.|.:...  .||| 
Zfish   334 IGMRGYSIAAPLGS---PLIKNLSVAILRLSESGELDYFRSK----WWASSCVAKDSK--GAPLK 389

  Fly   587 -----FISLLVAY------FLALLIL 601
                 .:.||:|:      ||||:.|
Zfish   390 PASLKGVFLLLAFGLGLGIFLALMEL 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 48/235 (20%)
si:ch211-251b21.1NP_001138274.1 PBP2_iGluR_non_NMDA_like 25..375 CDD:270403 77/372 (21%)
Lig_chan 146..396 CDD:278489 56/276 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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