DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and grid1b

DIOPT Version :9

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_009304811.1 Gene:grid1b / 557511 ZFINID:ZDB-GENE-121214-84 Length:1048 Species:Danio rerio


Alignment Length:780 Identity:152/780 - (19%)
Similarity:266/780 - (34%) Gaps:265/780 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RLIVFNLLEINLSNLMVFHCWSIKEAFPL-VEMLNQN--GIFSQYIDVQNPDNLANVHKEYLDSD 69
            :.|||...:.::..|.||...:.::...: ::.:::|  |:||........:.| |.::     |
Zfish   164 KFIVFYDSDYDIRGLQVFLDQTSRQGLDVSLQRVDRNISGVFSSLFTSMRTEEL-NRYR-----D 222

  Fly    70 LVRLGVFLDLGCDKAELVTNQSSRARLYNQNLHWLLYDEAGNFTKLTQLFEGANLSLNADVTYVS 134
            .:|..:.| |....|::..:|:....|.:::.||:..:|..:.|::.:|   |:.||        
Zfish   223 TLRRAILL-LSPRGAQVFIHQAVETNLASKDSHWVFVNEEISDTEILEL---AHSSL-------- 275

  Fly   135 REDEERFILHDVYNKGSHLGGKLNIT-------VDQTLQCNR-SH------CQVKE-YL-----S 179
                                |::.:.       .|.::.|.| ||      |..:| ||     |
Zfish   276 --------------------GRMTVVRQIFPLWRDSSVSCMRNSHRISSLLCDPQEGYLQSLEVS 320

  Fly   180 ELHLRPRLQHRMDLSSVTFR---------LAAL----VSVLPINSSEEEL--------------L 217
            .|:|...:   :.|::..:|         :|:|    .|..|.|.....|              :
Zfish   321 NLYLYDSV---LMLANAFYRKLEDRKWHSMASLNCIRKSTKPWNGGWSMLETIQKGRITGLTGIM 382

  Fly   218 EFLNSDRDSHM-----------------------DSI---------SRIGNRL------------ 238
            :|:.:..:||:                       ||:         |||.|.:            
Zfish   383 DFMENGSNSHVQFEILGTSFSETFGKDIKRLATWDSVHGLNGSLKESRIENGMQGVTVKVVTLLE 447

  Fly   239 ---IMHTQEILGFKLHY--------------------------------IWCGTWSVQDAFGGAI 268
               :|..:.|||....|                                :..|:|:      |.|
Zfish   448 DPFVMVAENILGQPKRYKGFSIDVLEALAKILGFKYDIYQVADSKYGSQLSNGSWN------GMI 506

  Fly   269 GMLTNESAELCTTPFVPSWNRLHYLHPMTEQAQFRAVCMFRTPHNAGIKAAVF--LEPFMPSVWF 331
            |.|.|:.|:|..:....:..|.:.:........:....:.|.|..   |..:|  ..||..:||.
Zfish   507 GELINKRADLAVSAITITPERENVVDFSKRYMDYSVGILHRKPEE---KINIFSLFAPFDLAVWA 568

  Fly   332 AFAGLLIFAGVLLWMIFHLERHWMQR---------CLDFIPSLLSSCLISFGAACIQGSYLMPKS 387
            ..|..:...|||   ||.|.|..|.|         ......||.|:..|.:||...||...:..|
Zfish   569 CIAAAIPVVGVL---IFLLTRMQMLRSQNPPGAHHASSMSNSLHSAIWIVYGAFVQQGGDSVVGS 630

  Fly   388 AGGRLAFIAVMLTSFLMYNYYTSIVVSTLLGSPVRSNIRTIQQLADSSLDVGFDTVPFTKTYLVS 452
            ...|:...:..|.:.::.:.||:.:.:.|..|.:.:.|||.|.|| ..:|..:.||..:..|   
Zfish   631 VALRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNTIRTFQDLA-RQMDFAYGTVRDSAVY--- 691

  Fly   453 SPRPDIRSLYKQKVESKRDPNSVWL-----------------SPEEGVIRVRDQPGFVYTSEASF 500
                   ..:|.|..:..:.:|.:.                 ||.||:.:.:..|       .:|
Zfish   692 -------DYFKAKGTNPLEQDSTYAELWRTISKNNGQDFSVSSPSEGIRKAKKGP-------YAF 742

  Fly   501 MYHFVEKHYLPREISDLNEIIL--RPESAVYG--MVHLNSTYRQLLTQLQVRMLETG-ITSKQSR 560
            ::......|......|....:.  ...|..||  |.| .|.||.|::|..:.:.|.| :...:.:
Zfish   743 LWDMAVVEYAALTDDDCTITVSGNSMSSKGYGIAMQH-GSPYRDLISQKILELQEKGDLDVLKQK 806

  Fly   561 FFSKT------------------KLHTFSNSFVIQVGMEYAAPLFISLLVAYFLALLILILEICW 607
            ::.:|                  |||:|:..|.|             |.....||.|:..||:.|
Zfish   807 WWPRTGRCDLNSHSNAQPDGRSLKLHSFAGVFCI-------------LAAGLLLACLVAALEMWW 858

  Fly   608  607
            Zfish   859  858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 59/254 (23%)
grid1bXP_009304811.1 PBP1_iGluR_delta_1 25..424 CDD:107387 53/300 (18%)
ANF_receptor 36..400 CDD:279440 51/276 (18%)
Periplasmic_Binding_Protein_Type_2 437..809 CDD:304360 81/402 (20%)
Lig_chan 565..840 CDD:278489 66/296 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591105
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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