DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and Ir40a

DIOPT Version :9

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster


Alignment Length:709 Identity:127/709 - (17%)
Similarity:241/709 - (33%) Gaps:216/709 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 CDKAELVTNQSSRARLYNQNLHWLLYDEAGNFTKLTQLF--------EGANLSLNADVTYVSRED 137
            |.|...|.......||:..|...:::.:       |:||        :|||..::..:      |
  Fly    63 CQKERNVYLDDFLQRLHRSNYKSVVFSQ-------TELFFQHIEENLQGANECISLIL------D 114

  Fly   138 EERFILHDVYNKGSHLGGKLNITV-------------------------------------DQTL 165
            |...:|:.::::  |||.:|::.:                                     :|..
  Fly   115 EPNQLLNSLHDR--HLGHRLSLFIFYWGARWPPSSRVIRFREPLRVVVVTRPRKKAFRIYYNQAR 177

  Fly   166 QCNRSHCQVKEY-------LSELHLRP-RLQHRMDLSSVTFRLAALVS-----VLPINSSEEELL 217
            .|:.|..|:..:       |..:.|.| .|....:....|||:....|     |...|:|.||..
  Fly   178 PCSDSQLQLVNWYDGDNLGLQRIPLLPTALSVYANFKGRTFRVPVFHSPPWFWVTYCNNSFEEDE 242

  Fly   218 EFLNSDRDSHMDSISR--------IGNRLIMHTQEILGFKLHYIWC-----GTWSVQ------DA 263
            || ||     :|||.:        ..:||:|...:.:.|:..||..     |:...:      |:
  Fly   243 EF-NS-----LDSIEKRKVRVTGGRDHRLLMLLSKHMNFRFKYIEAPGRTQGSMRSEDGKDSNDS 301

  Fly   264 FGGAIGMLTNESAELCTTPFVPSWNRLHYLH----PMTEQAQFRAVCMFRTPHNAGIKAAVFLEP 324
            |.|.||:|.:..|:........||.|...:.    .:.:...|..    ..|.... :|...:.|
  Fly   302 FTGGIGLLQSGQADFFLGDVGLSWERRKAIEFSFFTLADSGAFAT----HAPRRLN-EALAIMRP 361

  Fly   325 FMPSVWFAFAGLLIFAGVLLWMIFHL----ERHWMQRCLDFIPSL---------LSSCLISFGAA 376
            |...:|......:||:|.:.:.|..|    .|.|....::.:..|         ::..|:.....
  Fly   362 FKQDIWPHLILTIIFSGPIFYGIIALPYIWRRRWANSDVEHLGELYIHMTYLKEITPRLLKLKPR 426

  Fly   377 CIQGSYLMPKSA----------------------GGRLAFIAV---MLTSFLMYNYYTSIVVSTL 416
            .:..::.||...                      |.|..|:.:   :..::::.:.|::.:.|..
  Fly   427 TVLSAHQMPHQLFQKCIWFTLRLFLKQSCNELHNGYRAKFLTIVYWIAATYVLADVYSAQLTSQF 491

  Fly   417 LGSPVRSNIRTIQQLADSSLDVGF----------------DTVPFTKTYLVSSPRPDIRSLYKQK 465
            ........|.|:|:|..:.:..|:                .|..|.:.|          :|.:|:
  Fly   492 ARPAREPPINTLQRLQAAMIHDGYRLYVEKESSSLEMLENGTELFRQLY----------ALMRQQ 546

  Fly   466 VESKRDPNSVWLSPEEGVIRVRDQPG-------------FVYTSEASFMYHFVEKHYLPRE---- 513
            |.:  ||...::...|..|::..:.|             |......|..:...:|.|....    
  Fly   547 VIN--DPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNNFQLSQKLYTRYSAVAV 609

  Fly   514 ------ISDLNEIILRP-ESAVYGMVHLNSTYRQLLTQLQVRMLETGITSKQSRFFSKTKLHTFS 571
                  :..||.::::. ||.:...:......:|.......|:.:..:.:|.|..:|:|:  ::.
  Fly   610 QIGCPFLGSLNNVLMQLFESGILDKMTAAEYAKQYQEVEATRIYKGSVQAKNSEAYSRTE--SYD 672

  Fly   572 NSFVIQVGMEYAAPLFISLLVAYFLALLILILEI-------------C----WARYAKK 613
            ::.:..:.:......||:|.|....|.:||:|||             |    |.||.:|
  Fly   673 STVISPLNLRMLQGAFIALGVGSLAAGVILLLEIVFIKLDQARLWMLCSRLQWIRYDRK 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 43/302 (14%)
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 33/127 (26%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 21/98 (21%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 24/152 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462759
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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