DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and Ir25a

DIOPT Version :9

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster


Alignment Length:753 Identity:142/753 - (18%)
Similarity:240/753 - (31%) Gaps:282/753 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SIKEAFPLVEMLNQNGIFSQYIDVQNPDNLAN-------------VHKEYLDSDLVRLGV----- 75
            |:|.|:     ..:|  |:.:...||...:::             .:.:|.|    |||:     
  Fly   249 SVKPAY-----FERN--FAWHAITQNEGEISSQRDNATIMFMKPMAYTQYRD----RLGLLRTTY 302

  Fly    76 ------------FLDLGCDKAELVTNQSSRARLYNQNLHWLLYDEAGNFTKLTQLFEGANL-SLN 127
                        :.||.. ::.|...:..::..:.:::.:|..|:          |:|.|. ..|
  Fly   303 NLNEEPQLSSAFYFDLAL-RSFLTIKEMLQSGAWPKDMEYLNCDD----------FQGGNTPQRN 356

  Fly   128 ADVTYVSREDEERFILHDVYNKGSHLGGKLNIT----------VDQTLQCNRSHCQVKEYLSELH 182
            .|             |.|.:.|         ||          |.|:.|....|..:|       
  Fly   357 LD-------------LRDYFTK---------ITEPTSYGTFDLVTQSTQPFNGHSFMK------- 392

  Fly   183 LRPRLQHRMDLSSVTFRLAALVS-------VLPINS----SEEELLEFLNSD------------- 223
                  ..||::.:..|..:.|:       :..:||    .:||.::.|.:|             
  Fly   393 ------FEMDINVLQIRGGSSVNSKSIGKWISGLNSELIVKDEEQMKNLTADTVYRIFTVVQAPF 451

  Fly   224 --RDSH---------MDSISRIGNRLIMH----TQEILGFKLHYIWCGTWSVQDAFGGAIGMLTN 273
              ||..         :|.|:.|.  .|:|    .||:...|.     |.......:.|.:..|.:
  Fly   452 IMRDETAPKGYKGYCIDLINEIA--AIVHFDYTIQEVEDGKF-----GNMDENGQWNGIVKKLMD 509

  Fly   274 ESAELCTTPFVPSWNRLHYLHPMTEQAQFRAVCMFRTPHNAGIKAAVFLE-PFMPS--------- 328
            :.|::             .|..|:..|:...|..|..|:...:...:.:: |..||         
  Fly   510 KQADI-------------GLGSMSVMAEREIVIDFTVPYYDLVGITIMMQRPSSPSSLFKFLTVL 561

  Fly   329 ---VWFAFAGLLIFAGVLLWMIFHLERHW----------------------MQRCLDFIPSLLSS 368
               ||........|...|:| ||.   .|                      ::.||.|       
  Fly   562 ETNVWLCILAAYFFTSFLMW-IFD---RWSPYSYQNNREKYKDDEEKREFNLKECLWF------- 615

  Fly   369 CLISFGAACIQGSYLMPKSAGGRLAFIAVMLTSFLMYNYYTSIVVSTL----LGSPVRS------ 423
            |:.|...   ||....||:..|||......|..|::...||:.:.:.|    |.:||.|      
  Fly   616 CMTSLTP---QGGGEAPKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAK 677

  Fly   424 -------------------NIRTIQQL-----ADSSLDVGFDTVPFTKTYLVSSPRPDIRSLYKQ 464
                               .:..|:|:     .|.||:.....|..:|..:...|..|..:...|
  Fly   678 QYKILYAPLNGSSAMTYFERMSNIEQMFYEIWKDLSLNDSLTAVERSKLAVWDYPVSDKYTKMWQ 742

  Fly   465 KVESKRDPNSVWLSPEEGVIRVRDQ---PGFVYTSEASFMYHFVEKHYLPREISDL----NEIIL 522
            .::..:.|.::    :|.|.|||:.   .||.:..:|:      :..||.....||    .|...
  Fly   743 AMQEAKLPATL----DEAVARVRNSTAATGFAFLGDAT------DIRYLQLTNCDLQVVGEEFSR 797

  Fly   523 RPES-AVYGMVHLNSTYRQ-LLTQLQVRMLETGITSKQSRFFSKTKLHTFSNSFVIQ-------- 577
            :|.: ||....||...:.. :||.|..|.||            |.|...:.|...:.        
  Fly   798 KPYAIAVQQGSHLKDQFNNAILTLLNKRQLE------------KLKEKWWKNDEALAKCDKPEDQ 850

  Fly   578 ---VGMEYAAPLFISLLVAYFLALLILILEICWARYAK 612
               :.::....:||.:.|...:|.:.|:.|..|.||.|
  Fly   851 SDGISIQNIGGVFIVIFVGIGMACITLVFEYWWYRYRK 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 65/301 (22%)
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 38/233 (16%)
PBP2_iGluR_putative 438..836 CDD:270435 90/453 (20%)
Lig_chan 565..870 CDD:278489 70/340 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462808
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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