DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and GRIN2C

DIOPT Version :9

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_016880033.1 Gene:GRIN2C / 2905 HGNCID:4587 Length:1337 Species:Homo sapiens


Alignment Length:311 Identity:61/311 - (19%)
Similarity:105/311 - (33%) Gaps:99/311 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 AIGMLT--NESAELC--TTPFVPSWNRLHYLHPMTEQAQFRAVCMFRTPHNAGIKAAVFLEPFMP 327
            |||.||  .|.:|:.  :.|||.:                 .:.:.....|..:..:.||||:.|
Human   581 AIGSLTINEERSEIVDFSVPFVET-----------------GISVMVARSNGTVSPSAFLEPYSP 628

  Fly   328 SVW-FAFAGLLIFAGVLLWMIFHLERHWMQRCLDFIPSLLSSCLISFGAACIQGSYLMPKSAGGR 391
            :|| ..|...|....:.::|..:           |.|       :|:.....:|     |.:||.
Human   629 AVWVMMFVMCLTVVAITVFMFEY-----------FSP-------VSYNQNLTRG-----KKSGGP 670

  Fly   392 LAFI--AVMLTSFLMYNYYTSIVVSTLLGSPVRSNIRTIQQLADSSLDVGFDTVPFTKTYLVSSP 454
            ...|  :|.|...|::|  .|:.:....|:..:..:          |...|..|.|..:|..:..
Human   671 AFTIGKSVWLLWALVFN--NSVPIENPRGTTSKIMV----------LVWAFFAVIFLASYTANLA 723

  Fly   455 RPDIRSLYKQKVESKRDPNSVWLSPEEGVIRVRDQPGFVYTSEASFMYHFVEKHYLPREISDLNE 519
            ...|:..|...|....|..|:.|          :..|..:|:..:|...:.:             
Human   724 AFMIQEQYIDTVSGLSDKKSLHL----------ENTGVAWTAFKTFCSDYFQ------------- 765

  Fly   520 IILRPESAV----YGMV-------HLNSTYRQLLTQL---QVRMLETGITS 556
               ||:...    :|.|       ::.|.||.:.|.:   ..|.:|..:||
Human   766 ---RPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTS 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 43/241 (18%)
GRIN2CXP_016880033.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155924
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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