DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and GRIN2A

DIOPT Version :9

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_016878661.1 Gene:GRIN2A / 2903 HGNCID:4585 Length:1516 Species:Homo sapiens


Alignment Length:495 Identity:102/495 - (20%)
Similarity:166/495 - (33%) Gaps:140/495 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SQYIDVQNPDNLANVHKEYLDSDL---VRLGVFLDLGCDKAELVTNQSS-----------RARLY 97
            ::.|..:.|..|.:|..:..|..|   ||.|:.:        |.|..||           :|..|
Human   317 TELIPKEFPSGLISVSYDDWDYSLEARVRDGIGI--------LTTAASSMLEKFSYIPEAKASCY 373

  Fly    98 NQ---------NLHWLLYDEAGNFTKLTQLFEGANLSLNADVTYVSREDEERFILHD-----VYN 148
            .|         .||..:.    |.|     ::|.:||..          ||.:.:|.     |.|
Human   374 GQMERPEVPMHTLHPFMV----NVT-----WDGKDLSFT----------EEGYQVHPRLVVIVLN 419

  Fly   149 KGSHLGGKLNITVDQTLQCNRSHCQVKEYLSELHLRPRLQHRMDLSSVTFRLAALVSV------- 206
            |... ..|:....:.||...  |.....|.|.....|...|   ||.||...|..|.|       
Human   420 KDRE-WEKVGKWENHTLSLR--HAVWPRYKSFSDCEPDDNH---LSIVTLEEAPFVIVEDIDPLT 478

  Fly   207 -------------LPINSSEEELLEFLNSDRDSHMDSISRIGNRLIMHTQEIL-------GFKLH 251
                         :.||:|..|.:......:...:|.:.:: :|.:..|.::.       |.|::
Human   479 ETCVRNTVPCRKFVKINNSTNEGMNVKKCCKGFCIDILKKL-SRTVKFTYDLYLVTNGKHGKKVN 542

  Fly   252 YIWCGTWS--VQDAFGGAIGMLT--NESAELC--TTPFVPSWNRLHYLHPMTEQAQFRAVCMFRT 310
            .:|.|...  |......|:|.||  .|.:|:.  :.|||.:                 .:.:..:
Human   543 NVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVET-----------------GISVMVS 590

  Fly   311 PHNAGIKAAVFLEPFMPSVW-FAFAGLLIFAGVLLWMIFHL-----ERHWMQRCLDFIPSL---- 365
            ..|..:..:.|||||..||| ..|..|||.:.:.:::..:.     .|:..:......||.    
Human   591 RSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPSFTIGK 655

  Fly   366 ---LSSCLISFGAACIQGSYLMPKSAGGRL-----AFIAVMLTSFLMYNYYTSIVVSTLLGSPVR 422
               |...|:...:..:|.    ||....::     ||.||:..:....|....::....:.....
Human   656 AIWLLWGLVFNNSVPVQN----PKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTG 716

  Fly   423 SNIRTIQQLADSSLDVGFDTVPFTKTYLVSSPRPDIRSLY 462
            .:.:..|:..|.|....|.|||      ..|...:||:.|
Human   717 LSDKKFQRPHDYSPPFRFGTVP------NGSTERNIRNNY 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 31/153 (20%)
GRIN2AXP_016878661.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155897
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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