DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and GRIK5

DIOPT Version :10

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_011525167.1 Gene:GRIK5 / 2901 HGNCID:4583 Length:982 Species:Homo sapiens


Alignment Length:476 Identity:104/476 - (21%)
Similarity:180/476 - (37%) Gaps:109/476 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 LAALVSVLPINSSE---------EELLEFLNSDRDSHMDSISRIGNR--------LIMHTQEILG 247
            ||...:.|.||.|:         ..:||.....|..:..::|  ||.        ::....|:|.
Human   397 LAMNATTLDINLSQTLANKTLVVTTILENPYVMRRPNFQALS--GNERFEGFCVDMLRELAELLR 459

  Fly   248 F--KLHYIWCGTWSVQDAFG---GAIGMLTN-ESAELCTTPFVPSWNRLHYLHPMTEQAQFRAVC 306
            |  :|..:..|.:...:..|   |.:|.|.| :.|:|....|             |..|:...|.
Human   460 FRYRLRLVEDGLYGAPEPNGSWTGMVGELINRQKADLAVAAF-------------TITAEREKVI 511

  Fly   307 MFRTPH-----------NAGIKAAV--FLEPFMPSVWFAFAGLLIFAGVLLWMIFHLERH-WM-- 355
            .|..|.           :.|.|...  ||:||.|:||.......:....:|::...|..: |.  
Human   512 DFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNP 576

  Fly   356 QRCLDFIPSLL-------SSCLISFGAACIQGSYLMPKSAGGRL------AFIAVMLTSFLMYNY 407
            ..||...|.:|       :|.....|....|||.:||::...|.      ||..::::|      
Human   577 HPCLRARPHILENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISS------ 635

  Fly   408 YTSIVVSTLLGSPVRSNIRTIQQLAD-SSLDVGFDTVPFTKTYLVSSPRPDIRSLYKQKVESKRD 471
            ||:.:.:.|....:...:.:...||| ::::.|......|.|:..:|.....:.::.. ::||: 
Human   636 YTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNY-MQSKQ- 698

  Fly   472 PNSVWLSPEEGVIRVRDQPGFVYTSEASFMYHFVEKHYLPREISDLNEIILRPESAVYGM-VHLN 535
            |:....|.|||:.|       |..|..:|:.......|..|...:|.:|....::..||: :.|.
Human   699 PSVFVKSTEEGIAR-------VLNSRYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLG 756

  Fly   536 STYRQLLT----QLQV---------RMLETGITSKQSRFFSKTKLHTFSNSFVIQVGMEYAAPLF 587
            |.:|..:|    |||.         :..|.|...|:....:|            .:|||....:|
Human   757 SPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRAK------------GLGMENIGGIF 809

  Fly   588 ISLLVAYFLALLILILEICWA 608
            |.|:....:|:.:.::|..|:
Human   810 IVLICGLIIAVFVAVMEFIWS 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..>508 CDD:459656 41/196 (21%)
GRIK5XP_011525167.1 PBP1_iGluR_Kainate_KA1_2 23..401 CDD:380616 2/3 (67%)
Periplasmic_Binding_Protein_Type_2 414..785 CDD:473866 85/400 (21%)

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