Sequence 1: | NP_649013.3 | Gene: | Ir75c / 39983 | FlyBaseID: | FBgn0261401 | Length: | 623 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036705.3 | Gene: | Grin2a / 24409 | RGDID: | 2737 | Length: | 1464 | Species: | Rattus norvegicus |
Alignment Length: | 578 | Identity: | 104/578 - (17%) |
---|---|---|---|
Similarity: | 189/578 - (32%) | Gaps: | 171/578 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 TSWPLYRLIVFNLLEINLSNLMVFHCWSIKEAFPLVEMLNQNGIFSQYIDVQNPDNLANVHKEYL 66
Fly 67 DSDLVRLGVFLDLGCDKAELVTNQSSRARLYNQNLHWLLYD-EAGNFTKLTQLFEGANLSLNAD- 129
Fly 130 ---------------VTYVSREDEERFI-------------------LHDVY------------- 147
Fly 148 ---NKGSHLGGKLNITV--------------DQTLQCNRSHCQVKEYLSELHLRPRLQHRMDLSS 195
Fly 196 VTFRLAALVSV--------------------LPINSSEEELLEFLNSDRDSHMDSISRIGNRLIM 240
Fly 241 HTQEIL-------GFKLHYIWCGTWS--VQDAFGGAIGMLT--NESAELC--TTPFVPSWNRLHY 292
Fly 293 LHPMTEQAQFRAVCMFRTPHNAGIKAAVFLEPFMPSVW-FAFAGLLIFAGVLLWMIFHL-----E 351
Fly 352 RHWMQRCLDFIPSL-------LSSCLISFGAACIQGSYLMPKSAGGRL-----AFIAVMLTSFLM 404
Fly 405 YNYYTSIVVSTLLGSPVRSNIRTIQQLADSSLDVGFDTVPFTKTYLVSSPRPDIRSLY 462 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir75c | NP_649013.3 | Lig_chan | 328..553 | CDD:306551 | 31/153 (20%) |
Grin2a | NP_036705.3 | PBP1_iGluR_NMDA_NR2 | 32..392 | CDD:107373 | 35/239 (15%) |
PBP2_iGluR_NMDA_Nr2 | 403..802 | CDD:270436 | 66/327 (20%) | ||
HisJ | <458..>541 | CDD:223904 | 17/100 (17%) | ||
Glutamate binding. /evidence=ECO:0000269|PubMed:16281028, ECO:0007744|PDB:2A5S, ECO:0007744|PDB:2A5T, ECO:0007744|PDB:4NF4, ECO:0007744|PDB:4NF8, ECO:0007744|PDB:5I56, ECO:0007744|PDB:5I57, ECO:0007744|PDB:5I58, ECO:0007744|PDB:5I59, ECO:0007744|PDB:5JTY | 511..513 | 0/1 (0%) | |||
Lig_chan | 556..828 | CDD:278489 | 31/153 (20%) | ||
Pore-forming. /evidence=ECO:0000250|UniProtKB:B7ZSK1 | 599..620 | 2/20 (10%) |